RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 TNFSF10P50591 281 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 EFNA3P52797 238 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 PNLIPRP1P54315 467 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 ADARP55265 1226 aaKnown RBP15.43■□□□□ 0.06
TRIM65-203ENST00000540812 PER3P56645 1201 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 KCNK10P57789 538 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 SNRPNP63162 240 aaKnown RBP15.43■□□□□ 0.06
TRIM65-203ENST00000540812 NAA25Q14CX7 972 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 TPSAB1Q15661 275 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 SYT16Q17RD7 645 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 ICE2Q659A1 982 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 ZNF324BQ6AW86 544 aaPredicted RBP15.43■□□□□ 0.06
TRIM65-203ENST00000540812 KIAA0930Q6ICG6 404 aaPredicted RBP15.43■□□□□ 0.06
TRIM65-203ENST00000540812 C4orf22Q6V702 233 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 CENPUQ71F23 418 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 GSTA5Q7RTV2 222 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 FJX1Q86VR8 437 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 ARHGEF39Q8N4T4 335 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 TRIM58Q8NG06 486 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 MMABQ96EY8 250 aaPredicted RBP15.43■□□□□ 0.06
TRIM65-203ENST00000540812 OR2A5Q96R48 311 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 CDC14AQ9UNH5 594 aa15.43■□□□□ 0.06
TRIM65-203ENST00000540812 DYTNA2CJ06 578 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 ENO4A6NNW6 628 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 AP3B1O00203 1094 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 PRF1P14222 555 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 PKMP14618 531 aaKnown RBP15.42■□□□□ 0.06
TRIM65-203ENST00000540812 OGNP20774 298 aaKnown RBP15.42■□□□□ 0.06
TRIM65-203ENST00000540812 CXCR2P25025 360 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 CLCN7P51798 805 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 TDGF1P3P51864 188 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 MAT1AQ00266 395 aaKnown RBP15.42■□□□□ 0.06
TRIM65-203ENST00000540812 SRSF11Q05519 484 aaKnown RBP15.42■□□□□ 0.06
TRIM65-203ENST00000540812 ARHGAP19Q14CB8 494 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 PCOLCEQ15113 449 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 CILP2Q8IUL8 1156 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 PLD3Q8IV08 490 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 ZC3H7AQ8IWR0 971 aaKnown RBP15.42■□□□□ 0.06
TRIM65-203ENST00000540812 REXO1L1PQ8IX06 675 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 SHISA5Q8N114 240 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 GIMAP7Q8NHV1 300 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 MVB12AQ96EY5 273 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 TCF12Q99081 682 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 KCNF1Q9H3M0 494 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 PCYOX1Q9UHG3 505 aa15.42■□□□□ 0.06
TRIM65-203ENST00000540812 MRPS2Q9Y399 296 aaKnown RBP15.42■□□□□ 0.06
TRIM65-203ENST00000540812 MYO7BQ6PIF6 2116 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 LOC102723996A0A087X1L8 192 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 A0A0A6YYC8 382 aaPredicted RBP15.41■□□□□ 0.06
TRIM65-203ENST00000540812 TRAV17A0A0B4J275 112 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 ARHGAP10A1A4S6 786 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 E7ENX8 843 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 I3L1I5 382 aaPredicted RBP15.41■□□□□ 0.06
TRIM65-203ENST00000540812 PCDH17O14917 1159 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 PHF2O75151 1096 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 BMP10O95393 424 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 SLC16A8O95907 504 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 FGGP02679 453 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 STATHP02808 62 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 CATP04040 527 aaKnown RBP15.41■□□□□ 0.06
TRIM65-203ENST00000540812 ITGAMP11215 1152 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 FDXRP22570 491 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 VPS41P49754 854 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 TAP2Q03519 686 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 PRDX1Q06830 199 aaKnown RBP15.41■□□□□ 0.06
TRIM65-203ENST00000540812 CUL1Q13616 776 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 TRIP13Q15645 432 aaPredicted RBP15.41■□□□□ 0.06
TRIM65-203ENST00000540812 GARNL3Q5VVW2 1013 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 ANKRD22Q5VYY1 191 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 NEPROQ6NW34 567 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 SRRM1Q8IYB3 904 aaKnown RBP15.41■□□□□ 0.06
TRIM65-203ENST00000540812 ZNF480Q8WV37 535 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 NR4A3Q92570 626 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 HAS2Q92819 552 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 TGIF2Q9GZN2 237 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 ZNF700Q9H0M5 742 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 MKKSQ9NPJ1 570 aaPredicted RBP15.41■□□□□ 0.06
TRIM65-203ENST00000540812 FAM114A2Q9NRY5 505 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 ABCF3Q9NUQ8 709 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 C14orf105Q9NVL8 296 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 ZKSCAN5Q9Y2L8 839 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 MED16Q9Y2X0 877 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 APCP25054 2843 aa15.41■□□□□ 0.06
TRIM65-203ENST00000540812 A0A1B0GUH1 482 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 E5RI56 91 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 SMAPO00193 183 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 HAT1O14929 419 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 PFDN6O15212 129 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 PRPF4O43172 522 aaKnown RBP eCLIP15.4■□□□□ 0.061e-7■■□□□ 14.3
TRIM65-203ENST00000540812 ZSCAN12O43309 604 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 WFS1O76024 890 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 CCNDBP1O95273 360 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 WDPCPO95876 746 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 ANXA5P08758 320 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 TNFRSF8P28908 595 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 CDK16Q00536 496 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 TMEM205Q6UW68 189 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 NEK10Q6ZWH5 1172 aa15.4■□□□□ 0.06
TRIM65-203ENST00000540812 CAND1Q86VP6 1230 aaKnown RBP15.4■□□□□ 0.06
TRIM65-203ENST00000540812 LRRC56Q8IYG6 542 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms