RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 HBEGFQ99075 208 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ACPTQ9BZG2 426 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 BRINP2Q9C0B6 783 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 ZMYND15Q9H091 742 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 MIR1-1HGQ9H1L0 117 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 PELI2Q9HAT8 420 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 POT1Q9NUX5 634 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 AIG1Q9NVV5 245 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 TAAR2Q9P1P5 351 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 APOBEC3BQ9UH17 382 aaKnown RBP13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 TAC3Q9UHF0 121 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 SH2B3Q9UQQ2 575 aa13.74□□□□□ -0.21
CYB561A3-216ENST00000540755 KIR2DS5A0A0G2JLQ3 304 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 A0A0G2JNG1 304 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 KIR2DS3K7RE56 304 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 FOXD2O60548 495 aaPredicted RBP13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 HSD3B1P14060 373 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 JUNDP17535 347 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 XRCC1P18887 633 aaPredicted RBP13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 GPX3P22352 226 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 HSD3B2P26439 372 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 SHMT2P34897 504 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 MPLP40238 635 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 SLC19A1P41440 591 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 LIMK1P53667 647 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 NXPH1P58417 271 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 KIR2DS5Q14953 304 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 TCEA2Q15560 299 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 HIST2H2ACQ16777 129 aaPredicted RBP13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 KIF19Q2TAC6 998 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 AP5B1Q2VPB7 878 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 ZNF542PQ5EBM4 170 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 SGO1Q5FBB7 561 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 HIST2H2AA3Q6FI13 130 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 MED27Q6P2C8 311 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 TAF8Q7Z7C8 310 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 C17orf64Q86WR6 236 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 PARP9Q8IXQ6 854 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 LAS2Q8IYD9 372 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 C10orf67Q8IYJ2 551 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 MIER2Q8N344 545 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 POU5F2Q8N7G0 328 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 UBE2E3Q969T4 207 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 SH3KBP1Q96B97 665 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 CNTNAP3BQ96NU0 1288 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 LRRC61Q9BV99 259 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 CNTNAP3Q9BZ76 1288 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 C1orf21Q9H246 121 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 BRF2Q9HAW0 419 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 LRTM1Q9HBL6 345 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 SDR39U1Q9NRG7 319 aaPredicted RBP13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 TMEM45AQ9NWC5 275 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 GEMIN8Q9NWZ8 242 aaKnown RBP13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 ASIC5Q9NY37 505 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 TSC22D4Q9Y3Q8 395 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 PCDHB11Q9Y5F2 797 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 PCDHGA5Q9Y5G8 931 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 GPR45Q9Y5Y3 372 aa13.73□□□□□ -0.21
CYB561A3-216ENST00000540755 HEATR5BQ9P2D3 2071 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 PRAMEF33A0A0G2JMD5 474 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 TM4SF5O14894 197 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 VILLO15195 856 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 EZRP15311 586 aaKnown RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 NQO1P15559 274 aaKnown RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 CPA2P48052 419 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 DIO3P55073 304 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 HMGCS1Q01581 520 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 CYLC2Q14093 348 aaPredicted RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 SLBPQ14493 270 aaKnown RBP eCLIP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 PDCD4Q53EL6 469 aaKnown RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 LAYNQ6UX15 382 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 ZFAND4Q86XD8 727 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 FAM129CQ86XR2 697 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 ARHGAP24Q8N264 748 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 C2orf73Q8N5S3 287 aaPredicted RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 ABHD11Q8NFV4 315 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 OR7G3Q8NG95 312 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 MTFMTQ96DP5 389 aaKnown RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 CMTM7Q96FZ5 175 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 NRTNQ99748 197 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 BTBD10Q9BSF8 475 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 PITHD1Q9GZP4 211 aaPredicted RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 MMADHCQ9H3L0 296 aaPredicted RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 XKR8Q9H6D3 395 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 C1orf109Q9NX04 203 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 TAS2R1Q9NYW7 299 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 NOP53Q9NZM5 478 aaKnown RBP13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 OR6C2Q9NZP2 312 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 FRYQ5TBA9 3013 aa13.72□□□□□ -0.21
CYB561A3-216ENST00000540755 LOC100653049A0A140TA62 436 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 PIPSLA2A3N6 862 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 B2RBV5 119 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 BCAT2O15382 392 aaPredicted RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 PRICKLE3O43900 615 aaPredicted RBP13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 RASSF9O75901 435 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 KRT34O76011 436 aa13.71□□□□□ -0.21
CYB561A3-216ENST00000540755 CELA2BP08218 269 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms