RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 SUPT3HO75486 399 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 STK17BO94768 372 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 IPO13O94829 963 aaKnown RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 WDR47O94967 919 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 DLGAP3O95886 979 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 S100BP04271 92 aaPredicted RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 CTSBP07858 339 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SBK3P0C264 359 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SPTBP11277 2137 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 EZRP15311 586 aaKnown RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 NPPBP16860 134 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF28P17035 718 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 KRT15P19012 456 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 CD82P27701 267 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 GCGRP47871 477 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF844Q08AG5 666 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 IFFO1Q0D2I5 559 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 FBXO48Q5FWF7 155 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SULT1C3Q6IMI6 304 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 FRMPD2BQ6IN97 320 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 PWWP2BQ6NUJ5 590 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SH2D5Q6ZV89 423 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 LCA5Q86VQ0 697 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 THOC6Q86W42 341 aaKnown RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 BPHLQ86WA6 291 aaPredicted RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 C17orf64Q86WR6 236 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 KDF1Q8NAX2 398 aaPredicted RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 OR8K5Q8NH50 307 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 NEIL2Q969S2 332 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ALKBH8Q96BT7 664 aaKnown RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF285Q96NJ3 590 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ZFYVE21Q9BQ24 234 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 HAUS8Q9BT25 410 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM109Q9BVC6 243 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ULBP3Q9BZM4 244 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ROPN1BQ9BZX4 212 aaPredicted RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SPRY4Q9C004 299 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SYNPO2LQ9H987 977 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 CNOT10Q9H9A5 744 aaKnown RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ROPN1Q9HAT0 212 aaPredicted RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 WWOXQ9NZC7 414 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 PTBP2Q9UKA9 531 aaKnown RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 PILRAQ9UKJ1 303 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 PLCL2Q9UPR0 1127 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 SLC22A14Q9Y267 594 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM184BQ9Y519 407 aaPredicted RBP6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 ASB1Q9Y576 335 aa6.69□□□□□ -1.34
LPCAT3-209ENST00000540060 A0A0J9YVX5 310 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 E7EQ34 232 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 STMND1H3BQB6 276 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 H7BY64 318 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 TAF4O00268 1085 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CPNE3O75131 537 aaKnown RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 GLRA3O75311 464 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 SCRG1O75711 98 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 STK16O75716 305 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 KIAA0754O94854 1291 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 MT-ND3P03897 115 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 GSTA1P08263 222 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 RBP1P09455 135 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 LIPCP11150 499 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CDH1P12830 882 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 EPORP19235 508 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 HRH2P25021 359 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 GDF5P43026 501 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 HSPA7P48741 367 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 AGTR2P50052 363 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ALDH18A1P54886 795 aaKnown RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ITGA1P56199 1179 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CSNK1G2P78368 415 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 RELAQ04206 551 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CDC16Q13042 620 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 MAP7Q14244 749 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ZC3H12BQ5HYM0 836 aaKnown RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CATSPEREQ5SY80 951 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 BEND6Q5SZJ8 279 aaPredicted RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 PRAMEF17Q5VTA0 474 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 LRRC70Q7Z2Q7 622 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ADCK2Q7Z695 626 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 TRABD2AQ86V40 505 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ZFAND4Q86XD8 727 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 DTX1Q86Y01 620 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM126BQ8IUX1 230 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 IQCKQ8N0W5 287 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM151AQ8N4L1 468 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF248Q8NDW4 579 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ABHD11Q8NFV4 315 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 MYRIPQ8NFW9 859 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 OR4K1Q8NGD4 311 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 SLC5A11Q8WWX8 675 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 FGF11Q92914 225 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ESAMQ96AP7 390 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 RNF31Q96EP0 1072 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 TSNARE1Q96NA8 513 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 CNTNAP3BQ96NU0 1288 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 PRAP1Q96NZ9 151 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 ZIM3Q96PE6 472 aa6.68□□□□□ -1.34
LPCAT3-209ENST00000540060 FCRL4Q96PJ5 515 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms