RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SEMA5BQ9P283 1151 aa14.84□□□□□ -0.03
DDB1-216ENST00000539739 IGHV5-51A0A0C4DH38 117 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 SLC9B1P1A6NJY1 282 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 SRRM3A6NNA2 597 aaPredicted RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 H7BY64 318 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 MLYCDO95822 493 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 ANKRD34CP0C6C1 535 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 ST6GAL1P15907 406 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 MAGP20916 626 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 GRK3P35626 688 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 ARL1P40616 181 aaPredicted RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 GRIA3P42263 894 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 LSSP48449 732 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 SEPHS1P49903 392 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 CCR8P51685 355 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 CCNG1P51959 295 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 INHBCP55103 352 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 IRF8Q02556 426 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 CLCQ05315 142 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 ZFP36L1Q07352 338 aaKnown RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 RBBP7Q16576 425 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 HES3Q5TGS1 186 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 CDCP2Q5VXM1 449 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 NXPE4Q6UWF7 544 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 TMPRSS11BQ86T26 416 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 SLITRK4Q8IW52 837 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 TRIM42Q8IWZ5 723 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 C19orf47Q8N9M1 422 aaKnown RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 ABHD11Q8NFV4 315 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 ZFAND2BQ8WV99 257 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 PRAP1Q96NZ9 151 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 GATA5Q9BWX5 397 aaPredicted RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 STRADBQ9C0K7 418 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 KLHL25Q9H0H3 589 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 NOL11Q9H8H0 719 aaKnown RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 ACTR5Q9H9F9 607 aaPredicted RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 PELI2Q9HAT8 420 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 SEMA4BQ9NPR2 832 aaPredicted RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 INTS9Q9NV88 658 aaKnown RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 CUEDC1Q9NWM3 386 aaPredicted RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 SOHLH2Q9NX45 425 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 DLL3Q9NYJ7 618 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
DDB1-216ENST00000539739 STK38LQ9Y2H1 464 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 KLK4Q9Y5K2 254 aa14.83□□□□□ -0.04
DDB1-216ENST00000539739 E7EQ34 232 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 OTCP00480 354 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 C1GALT1C1LP0DN25 315 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 PVRP15151 417 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 CHN1P15882 459 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 CXCR2P25025 360 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 CCKBRP32239 447 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 CDH13P55290 713 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 YBX1P67809 324 aaKnown RBP14.82□□□□□ -0.04
DDB1-216ENST00000539739 HSD11B2P80365 405 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 CHIT1Q13231 466 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 XKR6Q5GH73 641 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 ATG9BQ674R7 924 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 RPS27LQ71UM5 84 aaKnown RBP14.82□□□□□ -0.04
DDB1-216ENST00000539739 ARHGAP22Q7Z5H3 698 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 TBC1D19Q8N5T2 526 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 TRPC4APQ8TEL6 797 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 DYDC1Q8WWB3 177 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 KLHL6Q8WZ60 621 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 TCTN2Q96GX1 697 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 CNDP1Q96KN2 507 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 NSUN5Q96P11 429 aaKnown RBP14.82□□□□□ -0.04
DDB1-216ENST00000539739 TRMOQ9BU70 441 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 EHD1Q9H4M9 534 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 ZNF768Q9H5H4 540 aaKnown RBP14.82□□□□□ -0.04
DDB1-216ENST00000539739 ACTR8Q9H981 624 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 PDE7BQ9NP56 450 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 SLC6A20Q9NP91 592 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 CLCA2Q9UQC9 943 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 SH2B3Q9UQQ2 575 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 KLHL20Q9Y2M5 609 aa14.82□□□□□ -0.04
DDB1-216ENST00000539739 IGKV1-8A0A0C4DH67 115 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 HGSO14964 777 aaPredicted RBP14.81□□□□□ -0.04
DDB1-216ENST00000539739 NPHS1O60500 1241 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 UGDHO60701 494 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 FGF3P11487 239 aaPredicted RBP14.81□□□□□ -0.04
DDB1-216ENST00000539739 NELFEP18615 380 aaKnown RBP14.81□□□□□ -0.04
DDB1-216ENST00000539739 GRK2P25098 689 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 CSTF2P33240 577 aaKnown RBP eCLIP14.81□□□□□ -0.04
DDB1-216ENST00000539739 SERPINB5P36952 375 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 MLLT3P42568 568 aaPredicted RBP14.81□□□□□ -0.04
DDB1-216ENST00000539739 PUM1Q14671 1186 aaKnown RBP eCLIP14.81□□□□□ -0.044e-6■□□□□ 8.5
DDB1-216ENST00000539739 CHI3L2Q15782 390 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 TBCCQ15814 346 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 SNCBQ16143 134 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 CATSPEREQ5SY80 951 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 TMTC4Q5T4D3 741 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 ZNF425Q6IV72 752 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 SLCO4C1Q6ZQN7 724 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 FRMD7Q6ZUT3 714 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 B3GNT8Q7Z7M8 397 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 KRT78Q8N1N4 520 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 GRAMD1AQ96CP6 724 aa14.81□□□□□ -0.04
DDB1-216ENST00000539739 PTCD3Q96EY7 689 aaKnown RBP14.81□□□□□ -0.04
DDB1-216ENST00000539739 AIF1LQ9BQI0 150 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms