RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MAGEB18Q96M61 343 aa22.58■■□□□ 1.21
TMEM260-202ENST00000538838 DPYSL5Q9BPU6 564 aa22.58■■□□□ 1.21
TMEM260-202ENST00000538838 NTMT1Q9BV86 223 aa22.58■■□□□ 1.21
TMEM260-202ENST00000538838 TNFRSF12AQ9NP84 129 aa22.58■■□□□ 1.21
TMEM260-202ENST00000538838 CFAP54Q96N23 3096 aa22.58■■□□□ 1.21
TMEM260-202ENST00000538838 IGHV5-10-1A0A0J9YXX1 117 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 WFS1O76024 890 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 OR4F21O95013 312 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 THRAP10827 490 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 MDH1P40925 334 aaKnown RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 SLBPQ14493 270 aaKnown RBP eCLIP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 ZIC1Q15915 447 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 CLPPQ16740 277 aaPredicted RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PRSS42Q7Z5A4 293 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 SLCO6A1Q86UG4 719 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 CUZD1Q86UP6 607 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PAQR7Q86WK9 346 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 SLITRK4Q8IW52 837 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 WDR48Q8TAF3 677 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 WDR34Q96EX3 536 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PTCD3Q96EY7 689 aaKnown RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 CCDC74BQ96LY2 380 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PLCD4Q9BRC7 762 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 EHD1Q9H4M9 534 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 STK38LQ9Y2H1 464 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 RNF11Q9Y3C5 154 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 OR2A25A4D2G3 310 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 KLF11O14901 512 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 HAT1O14929 419 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 SNNO75324 88 aaPredicted RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 CLDN9O95484 217 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 FTH1P19P0C7X4 201 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 EBLN1P0CF75 366 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 SEPHS1P49903 392 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 NOVA1P51513 510 aaKnown RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PDX1P52945 283 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 CLDN6P56747 220 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 INSM1Q01101 510 aaPredicted RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PCDH1Q08174 1060 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 E2F2Q14209 437 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 RSPO4Q2I0M5 234 aaPredicted RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 MILR1Q7Z6M3 343 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 B3GNT8Q7Z7M8 397 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 FAM129CQ86XR2 697 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PLD3Q8IV08 490 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 ZNF740Q8NDX6 193 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 OR4K1Q8NGD4 311 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 SORT1Q99523 831 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 TMEM184CQ9NVA4 438 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 GEMIN8Q9NWZ8 242 aaKnown RBP22.57■■□□□ 1.2
TMEM260-202ENST00000538838 PDP2Q9P2J9 529 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 SNX7Q9UNH6 387 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 KLK4Q9Y5K2 254 aa22.57■■□□□ 1.2
TMEM260-202ENST00000538838 ESRRBO95718 433 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 HRH2P25021 359 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 CASP2P42575 452 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 PKNOX1P55347 436 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 SIM1P81133 766 aaPredicted RBP22.56■■□□□ 1.2
TMEM260-202ENST00000538838 REEP5Q00765 189 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 E2F1Q01094 437 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 NAA25Q14CX7 972 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 TBCCQ15814 346 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 DHRS13Q6UX07 377 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 L3MBTL4Q8NA19 623 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 RCBTB1Q8NDN9 531 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 AGR3Q8TD06 166 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 KCNA7Q96RP8 456 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 EML4Q9HC35 981 aaKnown RBP22.56■■□□□ 1.2
TMEM260-202ENST00000538838 SOHLH2Q9NX45 425 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 ANKMY1Q9P2S6 941 aa22.56■■□□□ 1.2
TMEM260-202ENST00000538838 KCNE1BA0A087WTH5 132 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 FEZF1A0PJY2 475 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 UGDHO60701 494 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 CEACAM1P13688 526 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 GALNT1Q10472 559 aaPredicted RBP22.55■■□□□ 1.2
TMEM260-202ENST00000538838 PHF19Q5T6S3 580 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 LIPJQ5W064 366 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 GRHL2Q6ISB3 625 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 RBM44Q6ZP01 1051 aaKnown RBP22.55■■□□□ 1.2
TMEM260-202ENST00000538838 CARFQ8N187 725 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 CDYL2Q8N8U2 506 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 ZUFSPQ96AP4 578 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 AIF1LQ9BQI0 150 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 EFCAB11Q9BUY7 163 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 ZNF768Q9H5H4 540 aaKnown RBP22.55■■□□□ 1.2
TMEM260-202ENST00000538838 SEMA5BQ9P283 1151 aa22.55■■□□□ 1.2
TMEM260-202ENST00000538838 CTSVO60911 334 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 ZBTB11O95625 1053 aaPredicted RBP22.54■■□□□ 1.2
TMEM260-202ENST00000538838 FOXA1P55317 472 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 OCRLQ01968 901 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 CPSF6Q16630 551 aaKnown RBP eCLIP22.54■■□□□ 1.2
TMEM260-202ENST00000538838 GRAMD1AQ96CP6 724 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 FCRL4Q96PJ5 515 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 FAM60AQ9NP50 221 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 SLCO1B3Q9NPD5 702 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 THAP1Q9NVV9 213 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 TRPS1Q9UHF7 1281 aa22.54■■□□□ 1.2
TMEM260-202ENST00000538838 TMEM233B4DJY2 109 aa22.53■■□□□ 1.2
TMEM260-202ENST00000538838 AGRPO00253 132 aa22.53■■□□□ 1.2
TMEM260-202ENST00000538838 FFAR3O14843 346 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms