RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 Q6ZS92 163 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 LRRC56Q8IYG6 542 aaPredicted RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 CPNE9Q8IYJ1 553 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 CSNK1A1LQ8N752 337 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 C2CD4AQ8NCU7 369 aaPredicted RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 MIEF2Q96C03 454 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 SNRNP40Q96DI7 357 aaKnown RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 C19orf60Q96EN9 201 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 MVB12AQ96EY5 273 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 AGAP4Q96P64 663 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 OR2A5Q96R48 311 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 EBNA1BP2Q99848 306 aaKnown RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 AARSD1Q9BTE6 412 aaKnown RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 CRB3Q9BUF7 120 aa13.8□□□□□ -0.2
COPS7A-209ENST00000538753 ILKAPQ9H0C8 392 aaPredicted RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 IARS2Q9NSE4 1012 aaKnown RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 RUVBL1Q9Y265 456 aaKnown RBP13.8□□□□□ -0.2
COPS7A-209ENST00000538753 CACNA1DQ01668 2161 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 BLACEA4D250 179 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 TXNDC9O14530 226 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 DNALI1O14645 258 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 AGFG2O95081 481 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 TTC4O95801 387 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 IMPA1P29218 277 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 TIAL1Q01085 375 aaKnown RBP eCLIP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 DSG2Q14126 1118 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 VWA2Q5GFL6 755 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 THEMIS2Q5TEJ8 643 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 GARNL3Q5VVW2 1013 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 ATG9BQ674R7 924 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 LRRC8EQ6NSJ5 796 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 UGT3A1Q6NUS8 523 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 IGFL2Q6UWQ7 119 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 UBE2R2Q712K3 238 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 PIWIL4Q7Z3Z4 852 aaKnown RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 PCGF5Q86SE9 256 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 PARP9Q8IXQ6 854 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 PRSS58Q8IYP2 241 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 CISD2Q8N5K1 135 aaKnown RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 GABPB2Q8TAK5 448 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 SLCO2A1Q92959 643 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 RERGQ96A58 199 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 LHPPQ9H008 270 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 LRRC4CQ9HCJ2 640 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 ABCF3Q9NUQ8 709 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 ASF1BQ9NVP2 202 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 ASIC3Q9UHC3 531 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 PCYOX1Q9UHG3 505 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 TRMT6Q9UJA5 497 aaKnown RBP13.79□□□□□ -0.2
COPS7A-209ENST00000538753 C3orf18Q9UK00 162 aa13.79□□□□□ -0.2
COPS7A-209ENST00000538753 PRPF4O43172 522 aaKnown RBP eCLIP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 HPP00738 406 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 ACPPP15309 386 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 SLC26A3P40879 764 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 DHX9Q08211 1270 aaKnown RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 Q0VFX4 171 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 MRPL49Q13405 166 aaKnown RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 HIF1AQ16665 826 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 EIF2S3LQ2VIR3 472 aaKnown RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 MSS51Q4VC12 460 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 CRB2Q5IJ48 1285 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 SPANXN3Q5MJ09 141 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 ADCK2Q7Z695 626 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 CUZD1Q86UP6 607 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 ARHGEF39Q8N4T4 335 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 AMER3Q8N944 861 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 MCOLN3Q8TDD5 553 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 EEF1AKMT1Q8WVE0 214 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 MMABQ96EY8 250 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 THOC3Q96J01 351 aaKnown RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 NDNQ99608 321 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 WDR77Q9BQA1 342 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 MESP1Q9BRJ9 268 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 NAT9Q9BTE0 207 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 DRC3Q9H069 523 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 CUEDC1Q9NWM3 386 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 TRMT1Q9NXH9 659 aaKnown RBP13.78□□□□□ -0.2
COPS7A-209ENST00000538753 TAS2R13Q9NYV9 303 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 TRPC4Q9UBN4 977 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 PCDHGA10Q9Y5H3 936 aa13.78□□□□□ -0.2
COPS7A-209ENST00000538753 H7BY64 318 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 MAP2K7O14733 419 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 HAT1O14929 419 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 FOXS1O43638 330 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 SEMA7AO75326 666 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 BANF1O75531 89 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 CBX6O95503 412 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 C8GP07360 202 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 TCP1P17987 556 aaKnown RBP13.77□□□□□ -0.21
COPS7A-209ENST00000538753 HRH2P25021 359 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 GABRB3P28472 473 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 GLRBP48167 497 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 RGS4P49798 205 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 FAM53BQ14153 422 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 MYO7BQ6PIF6 2116 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 CNTN4Q8IWV2 1026 aa13.77□□□□□ -0.21
COPS7A-209ENST00000538753 PPP4R1Q8TF05 950 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms