RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ITGB1P05556 798 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 THP07101 528 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 M6PRP20645 277 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 MLLT3P42568 568 aaPredicted RBP18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 BAK1Q16611 211 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 ERICH5Q6P6B1 374 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 BPHLQ86WA6 291 aaPredicted RBP18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 ATCAYQ86WG3 371 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 KRT73Q86Y46 540 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 ZZZ3Q8IYH5 903 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 ANKK1Q8NFD2 765 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 PKMYT1Q99640 499 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 ROGDIQ9GZN7 287 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 SLC22A4Q9H015 551 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 NUFIP1Q9UHK0 495 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 PATJQ8NI35 1801 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 EFCAB10A6NFE3 127 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 GFRA2O00451 464 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 B3GALT4O96024 378 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 GLUD1P00367 558 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 ODC1P11926 461 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 MC4RP32245 332 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 IQCCQ4KMZ1 466 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 ALG1LQ6GMV1 187 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 SYCE2Q6PIF2 218 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 TMPRSS11AQ6ZMR5 421 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 FAM109AQ8N4B1 249 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 DENND6BQ8NEG7 585 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 IGSF8Q969P0 613 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 MMP28Q9H239 520 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 TOR4AQ9NXH8 423 aa18.02■□□□□ 0.48
SFSWAP-207ENST00000538548 MANBAO00462 879 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 TNFRSF10BO14763 440 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 TAPBPO15533 448 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 ERP29P30040 261 aaKnown RBP18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 ACVRL1P37023 503 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 OR3A3P47888 321 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 SCN1BQ07699 218 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 ZNF79Q15937 498 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 LRRTM3Q86VH5 581 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 HOMEZQ8IX15 550 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 IQCF2Q8IXL9 164 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 REM2Q8IYK8 340 aaPredicted RBP18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 ZFAND1Q8TCF1 268 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 ASB15Q8WXK1 588 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 CITED4Q96RK1 184 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 MGLLQ99685 303 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 MKRN2Q9H000 416 aaKnown RBP18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 KATNBL1Q9H079 304 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 DIABLOQ9NR28 239 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 UBA2Q9UBT2 640 aaPredicted RBP18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 TRPS1Q9UHF7 1281 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 PRELID1Q9Y255 219 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 PCDHGB3Q9Y5G1 929 aa18.02■□□□□ 0.47
SFSWAP-207ENST00000538548 A0A1W2PQ09 198 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 CCDC182A6NF36 153 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 HAS3O00219 553 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 KCNK5O95279 499 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 GABRB1P18505 474 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 IDH2P48735 452 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 AFF1P51825 1210 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 TBX4P57082 545 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 TP53BP2Q13625 1128 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 TSTQ16762 297 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 ZMAT1Q5H9K5 638 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 METTL23Q86XA0 190 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 LIX1LQ8IVB5 337 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 SLC38A6Q8IZM9 456 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 FAM9CQ8IZT9 166 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 DEPDC4Q8N2C3 294 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 GPR151Q8TDV0 419 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 USP7Q93009 1102 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 TESCQ96BS2 214 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 TSEN34Q9BSV6 310 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 SRRQ9GZT4 340 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 ELOVL2Q9NXB9 296 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 FKBPLQ9UIM3 349 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 TSR3Q9UJK0 312 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 SNX7Q9UNH6 387 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 DLGAP4Q9Y2H0 992 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 DHRS7Q9Y394 339 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 ARIH1Q9Y4X5 557 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 A0A0X1KG70 313 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 IQCF5A8MTL0 148 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 ZNF780AO75290 641 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 GUCA1CO95843 209 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 SMPD1P17405 629 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 LPOP22079 712 aaPredicted RBP18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 NUDT1P36639 197 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 PTGER3P43115 390 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 HYAL2Q12891 473 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 ASAH1Q13510 395 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 ZNF792Q3KQV3 632 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 OR4F3Q6IEY1 312 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 FBXL22Q6P050 247 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 EFHBQ8N7U6 833 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 OR6J1Q8NGC5 347 aa18.01■□□□□ 0.47
SFSWAP-207ENST00000538548 C7orf34Q96L11 122 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms