RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 OR4F3Q6IEY1 312 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 TMIGD1Q6UXZ0 262 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 SLC35F5Q8WV83 523 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 SLC5A11Q8WWX8 675 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 BRD7Q9NPI1 651 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 LYARQ9NX58 379 aaKnown RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 JUNP05412 331 aaKnown RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 H1F0P07305 194 aaKnown RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 COL9A3Q14050 684 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 LACTB2Q53H82 288 aaPredicted RBP16.37■□□□□ 0.21
SCARB1-205ENST00000538291 NANOGNBQ7Z5D8 188 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 TMEM126BQ8IUX1 230 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 LINC00471Q8N535 108 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 ZFP3Q96NJ6 502 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 STRADBQ9C0K7 418 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 ANKRA2Q9H9E1 313 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 ZIM2Q9NZV7 527 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 RIMKLBQ9ULI2 386 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 NID2Q14112 1375 aa16.37■□□□□ 0.21
SCARB1-205ENST00000538291 TNFRSF10BO14763 440 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 MUSKO15146 869 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 RLN2P04090 185 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 PER3P56645 1201 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 RAB8AP61006 207 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 LGI4Q8N135 537 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 ASPNQ9BXN1 380 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 B3GNT4Q9C0J1 378 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 PTGES2Q9H7Z7 377 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 EME2A4GXA9 379 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 AREL1O15033 823 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 CHRM5P08912 532 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 CDH1P12830 882 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 CCINQ13939 588 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 SEMA3AQ14563 771 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 ZFP69Q49AA0 526 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 TMEM17Q86X19 198 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 UBE2J2Q8N2K1 259 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 HPS1Q92902 700 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 TLCD1Q96CP7 247 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 ELAC1Q9H777 363 aaKnown RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 TXNRD2Q9NNW7 524 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 FAM221BA6H8Z2 402 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 BCHEP06276 602 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 DLDP09622 509 aaKnown RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 HERC3Q15034 1050 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.214e-9■■□□□ 11.8
SCARB1-205ENST00000538291 CDCA2Q69YH5 1023 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 AGTRAPQ6RW13 159 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 OSTM1Q86WC4 334 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 DEFB119Q8N690 84 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 OR52E4Q8NGH9 312 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 OR6N1Q8NGY5 312 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 ADAD1Q96M93 576 aaKnown RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 RAD9AQ99638 391 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 DENND2DQ9H6A0 471 aaPredicted RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 AQP12BA6NM10 295 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 KHNYNO15037 678 aaKnown RBP16.36■□□□□ 0.21
SCARB1-205ENST00000538291 GP1BBP13224 206 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 HLA-EP13747 358 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 DUOXA1Q1HG43 343 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 AQP12AQ8IXF9 295 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 MAPK15Q8TD08 544 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 ACOT12Q8WYK0 555 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 CXorf21Q9HAI6 301 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 UBR1Q8IWV7 1749 aa16.36■□□□□ 0.21
SCARB1-205ENST00000538291 A0A1W2PRQ8 180 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 AHSA1O95433 338 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 ZNF792Q3KQV3 632 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 ZNF627Q7L945 461 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 ZSCAN4Q8NAM6 433 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-205ENST00000538291 ZNF221Q9UK13 617 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 POMPQ9Y244 141 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 TRBC2A0A5B9 178 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 RIN1Q13671 783 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 NIPAL1Q6NVV3 410 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 ZNF280BQ86YH2 543 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 AKTIPQ9H8T0 292 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 SP140LQ9H930 580 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 TMEM248Q9NWD8 314 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 GALPQ9UBC7 116 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 OR14I1A6ND48 311 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 STATHP02808 62 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 TYRP1P17643 537 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 PEX2P28328 305 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 DNAJA1P31689 397 aaKnown RBP16.35■□□□□ 0.21
SCARB1-205ENST00000538291 GRIA1P42261 906 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 ZNF41P51814 821 aaPredicted RBP16.35■□□□□ 0.21
SCARB1-205ENST00000538291 ELOCQ15369 112 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 FAM189A2Q15884 450 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 THOC7Q6I9Y2 204 aaKnown RBP16.35■□□□□ 0.21
SCARB1-205ENST00000538291 RNF19BQ6ZMZ0 732 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 PHOSPHO1Q8TCT1 267 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 CGREF1Q99674 301 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 DKKL1Q9UK85 242 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 SLIT2O94813 1529 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 VEGFDO43915 354 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 CSTBP04080 98 aaKnown RBP16.35■□□□□ 0.21
SCARB1-205ENST00000538291 NR4A1P22736 598 aa16.35■□□□□ 0.21
SCARB1-205ENST00000538291 FIP1L1Q6UN15 594 aaKnown RBP16.35■□□□□ 0.21
SCARB1-205ENST00000538291 TMCO2Q7Z6W1 182 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms