RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 FAM13CQ8NE31 585 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 OR5T3Q8NGG3 340 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 NEIL2Q969S2 332 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 KLHL29Q96CT2 875 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 TRIM8Q9BZR9 551 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 SEMA6CQ9H3T2 930 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ZDHHC18Q9NUE0 388 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 KCMF1Q9P0J7 381 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 SATB2Q9UPW6 733 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 WNK2Q9Y3S1 2297 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 NINQ8N4C6 2090 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 CSF2P04141 144 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 SESN3P58005 492 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 NFKB2Q00653 900 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ZNF267Q14586 743 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 FBXW10Q5XX13 1052 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 NEK5Q6P3R8 708 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 IYDQ6PHW0 289 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 RABEPKQ7Z6M1 372 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 CROCCP2Q86T23 111 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 PRR22Q8IZ63 422 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 AGGF1Q8N302 714 aaeCLIP6.97□□□□□ -1.29
MSH6-209ENST00000538136 TMEM132CQ8N3T6 1108 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ZNF276Q8N554 614 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 SIRT6Q8N6T7 355 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 CD200R1Q8TD46 325 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 REXO4Q9GZR2 422 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 SPRTNQ9H040 489 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 ZBTB20Q9HC78 741 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 PILRBQ9UKJ0 227 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 FBXO4Q9UKT5 387 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 EIF3HO15372 352 aaKnown RBP eCLIP6.97□□□□□ -1.296e-7■■□□□ 13.3
MSH6-209ENST00000538136 RRP8O43159 456 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 TRAPPC6AO75865 159 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 SEC24DO94855 1032 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 ZBTB11O95625 1053 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 ALDOAP04075 364 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 FHP07954 510 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ANXA4P09525 319 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 TLX1P31314 330 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 SHMT2P34897 504 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ADRA1AP35348 466 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 KRT20P35900 424 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 PRIM2P49643 509 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 CCR8P51685 355 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 TGM3Q08188 693 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 TCF15Q12870 199 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 BTBD16Q32M84 506 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 CTSL3PQ5NE16 218 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 MED27Q6P2C8 311 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 TECPR1Q7Z6L1 1165 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 MCATQ8IVS2 390 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 CLEC4FQ8N1N0 589 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ARL10Q8N8L6 244 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 TP53I13Q8NBR0 393 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 OR4K1Q8NGD4 311 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 XAGE5Q8WWM1 108 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 KCNJ9Q92806 393 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 PTERQ96BW5 349 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 COQ10AQ96MF6 247 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 DPY30Q9C005 99 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 OCIAD1Q9NX40 245 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ZNF624Q9P2J8 865 aaPredicted RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 VPS4AQ9UN37 437 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 NEU3Q9UQ49 428 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ENTPD4Q9Y227 616 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 PMS2P1A4D2B8 440 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ARGFXA6NJG6 315 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 MAP2K7O14733 419 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 FLRT2O43155 660 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 IPO13O94829 963 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 HEXBP07686 556 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 B4GALNT1Q00973 533 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 CUL3Q13618 768 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 C16orf72Q14CZ0 275 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 RALGPS1Q5JS13 557 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ATP1A1-AS1Q5TC04 95 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ZNF547Q8IVP9 402 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 KCNV2Q8TDN2 545 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 NELL1Q92832 810 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 USP7Q93009 1102 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 CCDC74BQ96LY2 380 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 ANKRA2Q9H9E1 313 aa6.97□□□□□ -1.29
MSH6-209ENST00000538136 DDX18Q9NVP1 670 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 INTS10Q9NVR2 710 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.97□□□□□ -1.29
MSH6-209ENST00000538136 OR5K4A6NMS3 321 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 PLD2O14939 933 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 ZNF749O43361 778 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 CLDN9O95484 217 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 NME1P15531 152 aaKnown RBP6.96□□□□□ -1.29
MSH6-209ENST00000538136 ARNTP27540 789 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 NDUFS1P28331 727 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 KCNC1P48547 511 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 ATP6V0D1P61421 351 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 MRPS35P82673 323 aaKnown RBP6.96□□□□□ -1.29
MSH6-209ENST00000538136 XIAPP98170 497 aa6.96□□□□□ -1.29
MSH6-209ENST00000538136 EEF1A2Q05639 463 aaKnown RBP6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms