RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 PAGE2BQ5JRK9 111 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 RBM44Q6ZP01 1051 aaKnown RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 C1orf52Q8N6N3 182 aaKnown RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 TRIML2Q8N7C3 387 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 OR2L2Q8NH16 312 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 HUS1BQ8NHY5 278 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 WDR34Q96EX3 536 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 C11orf24Q96F05 449 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 HIC2Q96JB3 615 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 EFCAB11Q9BUY7 163 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 SGPP1Q9BX95 441 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 TRIM4Q9C037 500 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 DPEP2Q9H4A9 486 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 DMTF1Q9Y222 760 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 H0YAE9 185 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 SCAMP2O15127 329 aaKnown RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 EPN2O95208 641 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 SERPINA1P01009 418 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ALBP02768 609 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 EPHX1P07099 455 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 MYCLP1P12525 358 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 OPRD1P41143 372 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 IL12RB1P42701 662 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ARSFP54793 590 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 SH3BGRP55822 239 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 TSTA3Q13630 321 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 STARD3Q14849 445 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 NKG7Q16617 165 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 CYBRD1Q53TN4 286 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 OTUD3Q5T2D3 398 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 FAM46CQ5VWP2 391 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 UNC5DQ6UXZ4 953 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ADAMTSL4Q6UY14 1074 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 SERPINA11Q86U17 422 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ZNF547Q8IVP9 402 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ZNF786Q8N393 782 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 GALNT15Q8N3T1 639 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 ST13P5Q8NFI4 369 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 CHTF18Q8WVB6 975 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 FBXL20Q96IG2 436 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 SLC24A3Q9HC58 644 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 PRSS16Q9NQE7 514 aa15.13■□□□□ 0.01
MKS1-204ENST00000537529 THAP10Q9P2Z0 257 aaPredicted RBP15.13■□□□□ 0.01
MKS1-204ENST00000537529 MGAT4DA6NG13 374 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 ETHE1O95571 254 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 CST1P01037 141 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 ANXA4P09525 319 aaPredicted RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 WNT3P56703 355 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 RAE1P78406 368 aaKnown RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 CNTN1Q12860 1018 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 RUNX3Q13761 415 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 SLBPQ14493 270 aaKnown RBP eCLIP15.12■□□□□ 0.01
MKS1-204ENST00000537529 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 TANGO2Q6ICL3 276 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 BORAQ6PGQ7 559 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 TBPL2Q6SJ96 375 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 ABRAXAS1Q6UWZ7 409 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 XKR5Q6UX68 686 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 VITQ6UXI7 678 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 PATL1Q86TB9 770 aaKnown RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 ZDHHC13Q8IUH4 622 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 EID3Q8N140 333 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 CLEC4FQ8N1N0 589 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 SVOPLQ8N434 492 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 LMAN2LQ9H0V9 348 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 EHD1Q9H4M9 534 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 CERS4Q9HA82 394 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 TUBA8Q9NY65 449 aaPredicted RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 THEGQ9P2T0 379 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 KIAA1549LQ6ZVL6 1849 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 COL4A3Q01955 1670 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 CLIC1O00299 241 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 GNGT2O14610 69 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 SNAP29O95721 258 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 C1GALT1C1LP0DN25 315 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 NPPBP16860 134 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 TIA1P31483 386 aaKnown RBP eCLIP15.12■□□□□ 0.01
MKS1-204ENST00000537529 RPS13P62277 151 aaKnown RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 ADARB1P78563 741 aaKnown RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 HIST2H2ACQ16777 129 aaPredicted RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 HIST2H2AA3Q6FI13 130 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 ERICH5Q6P6B1 374 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 STK32CQ86UX6 486 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 ADHFE1Q8IWW8 467 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 YAF2Q8IY57 180 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 C10orf111Q8N326 155 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 NETO1Q8TDF5 533 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 DUSP26Q9BV47 211 aa15.12■□□□□ 0.01
MKS1-204ENST00000537529 RBM38Q9H0Z9 239 aaKnown RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 CCDC177Q9NQR7 707 aaPredicted RBP15.12■□□□□ 0.01
MKS1-204ENST00000537529 PRRC2BQ5JSZ5 2229 aaKnown RBP15.11■□□□□ 0.01
MKS1-204ENST00000537529 A0A087WXM4 84 aa15.11■□□□□ 0.01
MKS1-204ENST00000537529 CCDC160A6NGH7 325 aa15.11■□□□□ 0.01
MKS1-204ENST00000537529 G3V2T6 193 aa15.11■□□□□ 0.01
MKS1-204ENST00000537529 FOXE1O00358 373 aaPredicted RBP15.11■□□□□ 0.01
MKS1-204ENST00000537529 SCN2BO60939 215 aa15.11■□□□□ 0.01
MKS1-204ENST00000537529 CCNDBP1O95273 360 aa15.11■□□□□ 0.01
MKS1-204ENST00000537529 BMP10O95393 424 aa15.11■□□□□ 0.01
MKS1-204ENST00000537529 THRBP10828 461 aa15.11■□□□□ 0.01
MKS1-204ENST00000537529 ENGP17813 658 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms