RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 LEXMQ3ZCV2 418 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 IQCCQ4KMZ1 466 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 PRAMEF18Q5VWM3 479 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 STRADAQ7RTN6 431 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 DGLUCYQ7Z3D6 616 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 CIR1Q86X95 450 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-213ENST00000537002 KRT78Q8N1N4 520 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 FBXL6Q8N531 539 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 SNAPC3Q92966 411 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 RNF121Q9H920 327 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 KLHL28Q9NXS3 571 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 TRAV6A0A075B6T7 132 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 AXIN1O15169 862 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 DPM1O60762 260 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 CILPO75339 1184 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 UROSP10746 265 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 PIK3CBP42338 1070 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 SLC35A2P78381 396 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 IRF8Q02556 426 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
PTPRD-213ENST00000537002 DGKZQ13574 1117 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 SMCO1Q147U7 214 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 HAGHLQ6PII5 290 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ADGRD2Q7Z7M1 963 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 FBXO16Q8IX29 292 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-213ENST00000537002 SGTBQ96EQ0 304 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ARL5BQ96KC2 179 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 IPPKQ9H8X2 491 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 POPDC3Q9HBV1 291 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 IL37Q9NZH6 218 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 RPS6KB2Q9UBS0 482 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 CPA4Q9UI42 421 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 MAN2B2Q9Y2E5 1009 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 SLC35F4A4IF30 521 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 OR14I1A6ND48 311 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 APOC3P02656 99 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ANXA5P08758 320 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 OR1E1P30953 314 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 IFNGR2P38484 337 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ANXA11P50995 505 aaKnown RBP5.26□□□□□ -1.57
PTPRD-213ENST00000537002 PCDH1Q08174 1060 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF252P-AS1Q0IIN9 211 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 MFSD10Q14728 455 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 VEPH1Q14D04 833 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 SWI5Q1ZZU3 235 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 LRRC26Q2I0M4 334 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 USP45Q70EL2 814 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 TOMM5Q8N4H5 51 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 UFD1Q92890 307 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 GPR21Q99679 349 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ACO2Q99798 780 aaKnown RBP5.26□□□□□ -1.57
PTPRD-213ENST00000537002 FN3KQ9H479 309 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 CD93Q9NPY3 652 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ASAH2Q9NR71 780 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 TVP23BQ9NYZ1 205 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 AASSQ9UDR5 926 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 POLHQ9Y253 713 aa5.26□□□□□ -1.57
PTPRD-213ENST00000537002 ARFGEF1Q9Y6D6 1849 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 L7N2F9 121 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SMAD9O15198 467 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GJB1P08034 283 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GRK4P32298 578 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MATKP42679 507 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GMFBP60983 142 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 EMX1Q04741 257 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RCAN2Q14206 197 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ADPRMQ3LIE5 342 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CLVS2Q5SYC1 327 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 EEF1DP3Q658K8 133 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 FCRLBQ6BAA4 426 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 KIAA0930Q6ICG6 404 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 TRIM40Q6P9F5 258 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 STX12Q86Y82 276 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SIDT2Q8NBJ9 832 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 OR10G2Q8NGC3 310 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GRIN3AQ8TCU5 1115 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF675Q8TD23 568 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GANCQ8TET4 914 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 L3HYPDHQ96EM0 354 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PIWIL1Q96J94 861 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 POLR1EQ9GZS1 481 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 FARSBQ9NSD9 589 aaKnown RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 HPF1Q9NWY4 346 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 COL20A1Q9P218 1284 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SLC22A5O76082 557 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 MT-CYBP00156 380 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 EVI2BP34910 448 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ISL1P61371 349 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 RGS1Q08116 209 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 GRK1Q15835 563 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 LINGO2Q7L985 606 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF438Q7Z4V0 828 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CDK20Q8IZL9 346 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 SPAG16Q8N0X2 631 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PIAS4Q8N2W9 510 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PARP16Q8N5Y8 322 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 PRMT6Q96LA8 375 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-213ENST00000537002 BBS4Q96RK4 519 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 EBPLQ9BY08 206 aa5.25□□□□□ -1.57
PTPRD-213ENST00000537002 CDT1Q9H211 546 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms