RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 EZRP15311 586 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 CLCN7P51798 805 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PER3P56645 1201 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ARG2P78540 354 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TTLL9Q3SXZ7 439 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ZNF425Q6IV72 752 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 ZNF662Q6ZS27 426 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 REXO1L1PQ8IX06 675 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 OR1N1Q8NGS0 311 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 MMABQ96EY8 250 aaPredicted RBP18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 OR2A5Q96R48 311 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 MKKSQ9NPJ1 570 aaPredicted RBP18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 PTGFRNQ9P2B2 879 aa18.71■□□□□ 0.59
TNFRSF1B-204ENST00000536782 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 A0A1W2PQ72 361 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MAGEB16A2A368 324 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CTAGE9A4FU28 777 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 FFAR3O14843 346 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PCDH17O14917 1159 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 GPR42O15529 346 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SLC16A8O95907 504 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SERPINA7P05543 415 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 HEXBP07686 556 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CXCR5P32302 372 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SLC26A3P40879 764 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MAGEA6P43360 314 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 VPS41P49754 854 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ABATP80404 500 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 RELAQ04206 551 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 EEF1A2Q05639 463 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 GPS1Q13098 491 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 THOC5Q13769 683 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 DHX34Q14147 1143 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZNF470Q6ECI4 717 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 BCORP1Q8N888 145 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 AMER3Q8N944 861 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PRELID2Q8N945 189 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 FBXO15Q8NCQ5 510 aaPredicted RBP18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PPFIBP2Q8ND30 876 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 BRIX1Q8TDN6 353 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZNF480Q8WV37 535 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PSMF1Q92530 271 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SLC30A3Q99726 388 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SLX1AQ9BQ83 275 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TGIF2Q9GZN2 237 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CCDC68Q9H2F9 335 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SYNPO2LQ9H987 977 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 OLAHQ9NV23 265 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PCYOX1Q9UHG3 505 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 APCP25054 2843 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MYO7BQ6PIF6 2116 aa18.7■□□□□ 0.58
TNFRSF1B-204ENST00000536782 IGHV1-45A0A0A0MS14 117 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 FAM237BA0A1B0GVD1 139 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 E7ENX8 843 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SYF2O95926 243 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SOX11P35716 441 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TAP2Q03519 686 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 FAAH2Q6GMR7 532 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ADCK2Q7Z695 626 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CAND1Q86VP6 1230 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZNF669Q96BR6 464 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MAGEB10Q96LZ2 347 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 EBNA1BP2Q99848 306 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TRIM56Q9BRZ2 755 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 DRC3Q9H069 523 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ABCF3Q9NUQ8 709 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 RIC8BQ9NVN3 520 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 KLHL42Q9P2K6 505 aa18.69■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CSMD1Q96PZ7 3565 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 A0A0A6YYC8 382 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SDR42E2A6NKP2 422 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 I3L1I5 382 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SMAPO00193 183 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 FOXS1O43638 330 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ZBTB14O43829 449 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 WFS1O76024 890 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 BMP10O95393 424 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 KRT14P02533 472 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 UQCRHP07919 91 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MPC1LP0DKB6 136 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 MLNP12872 115 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 CUL1Q13616 776 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 THEMIS2Q5TEJ8 643 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ANKRD22Q5VYY1 191 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 RIPOR1Q6ZS17 1223 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ARHGEF39Q8N4T4 335 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 SIRT6Q8N6T7 355 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 GIMAP7Q8NHV1 300 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 ASB11Q8WXH4 323 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 KCNJ9Q92806 393 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 HAS2Q92819 552 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 FBXO6Q9NRD1 293 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 PLA2G3Q9NZ20 509 aa18.68■□□□□ 0.58
TNFRSF1B-204ENST00000536782 LOC102723996A0A087X1L8 192 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 TRAV17A0A0B4J275 112 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 GFYI3L273 518 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 HAT1O14929 419 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 JRKO75564 520 aa18.67■□□□□ 0.58
TNFRSF1B-204ENST00000536782 F7P08709 466 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms