RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 DPH7Q9BTV6 452 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SLC22A11Q9NSA0 550 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TAC3Q9UHF0 121 aa17.1■□□□□ 0.33
TNFRSF1A-209ENST00000536717 LOC105369274A0A096LPK9 316 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 LOC102723532A0A0G2JNH3 316 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 A0A0J9YVX5 310 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FITM1A5D6W6 292 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ARGFXA6NJG6 315 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MKRN2OSH3BPM6 223 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SRPX2O60687 465 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FAM155BO75949 473 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ATXN8OSP0DMR3 200 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ALAS2P22557 587 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 HSD17B2P37059 387 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ARSFP54793 590 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FOXL2P58012 376 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 GRM7Q14831 915 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 NKAIN1Q4KMZ8 207 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TCTN3Q6NUS6 607 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PAQR3Q6TCH7 311 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 UBE2R2Q712K3 238 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TAOK1Q7L7X3 1001 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TMEM151BQ8IW70 566 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 OR4N4Q8N0Y3 316 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 EEF1AKMT1Q8WVE0 214 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MRPS30Q9NP92 439 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 IFT80Q9P2H3 777 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 FETUBQ9UGM5 382 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ADAMTS6Q9UKP5 1117 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 PADI2Q9Y2J8 665 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CNTRLQ7Z7A1 2325 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SCN3AQ9NY46 2000 aa17.09■□□□□ 0.33
TNFRSF1A-209ENST00000536717 A0A1B0GX78 115 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PYCARD-AS1I3L0S3 204 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SAT1P21673 171 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 IMPA1P29218 277 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RPA3P35244 121 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SLC12A2P55011 1212 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 VSX2P58304 361 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PRDX1Q06830 199 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TSTA3Q13630 321 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 WASHC2DQ5SRD0 308 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 YOD1Q5VVQ6 348 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ICE2Q659A1 982 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 LRRC8EQ6NSJ5 796 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 FBXO42Q6P3S6 717 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 DTWD1Q8N5C7 304 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 GPR22Q99680 433 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PLCD4Q9BRC7 762 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ING2Q9H160 280 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SYNPO2LQ9H987 977 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CUTCQ9NTM9 273 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 NDOR1Q9UHB4 597 aa17.08■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZNF839A8K0R7 811 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 DSCR3O14972 297 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MED26O95402 600 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ONECUT2O95948 504 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PDGFAP04085 211 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 FDXRP22570 491 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SERPINB9P50453 376 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PGGT1BP53609 377 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 POU4F1Q01851 419 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PDAP1Q13442 181 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 NAA25Q14CX7 972 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZNF425Q6IV72 752 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ATG14Q6ZNE5 492 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PAQR7Q86WK9 346 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TSPAN17Q96FV3 270 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZFYVE21Q9BQ24 234 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PPCSQ9HAB8 311 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ANKMY1Q9P2S6 941 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 GPN3Q9UHW5 284 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZNF180Q9UJW8 692 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PDE10AQ9Y233 779 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MTO1Q9Y2Z2 717 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 PTRH2Q9Y3E5 179 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 MYO18BQ8IUG5 2567 aa17.07■□□□□ 0.32
TNFRSF1A-209ENST00000536717 KRT38O76015 456 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TSPAN12O95859 305 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 NUDT17P0C025 328 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CNTFP26441 200 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RGS4P49798 205 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ATP1A4Q13733 1029 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 USP10Q14694 798 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SSPNQ14714 243 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 LGSNQ5TDP6 509 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 COX15Q7KZN9 410 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 CNPY4Q8N129 248 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TTC29Q8NA56 475 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 OR2Y1Q8NGV0 311 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 OLFM1Q99784 485 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 TRIM4Q9C037 500 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ACSS2Q9NR19 701 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 ARGLU1Q9NWB6 273 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 RELNP78509 3460 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 SHBGP04278 402 aa17.06■□□□□ 0.32
TNFRSF1A-209ENST00000536717 C8GP07360 202 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms