RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 OR4K3Q96R72 315 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 GPR22Q99680 433 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 GPAMQ9HCL2 828 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 NINJ2Q9NZG7 142 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 ANKMY1Q9P2S6 941 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 RUVBL1Q9Y265 456 aaKnown RBP12.57□□□□□ -0.4
PRKDC-206ENST00000536429 MAN2B2Q9Y2E5 1009 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 MAU2Q9Y6X3 613 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 PCSK5Q92824 1860 aa12.57□□□□□ -0.4
PRKDC-206ENST00000536429 HYKKA2RU49 373 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 ARGFXA6NJG6 315 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 K7EM74 188 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 KIF2AO00139 706 aaPredicted RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 TUBB4AP04350 444 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 UMODP07911 640 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 HIST1H2AGP0C0S8 130 aaPredicted RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 CDH1P12830 882 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 NPPBP16860 134 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 NR1D1P20393 614 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 HIST1H2ADP20671 130 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 ARSFP54793 590 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 CSNK1G2P78368 415 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 POU4F1Q01851 419 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 USP10Q14694 798 aaKnown RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 ZKSCAN8Q15776 578 aaPredicted RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 C18orf21Q32NC0 220 aaPredicted RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 VN1R4Q7Z5H5 301 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 CMC1Q7Z7K0 106 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 SHISA5Q8N114 240 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 NKAPQ8N5F7 415 aaKnown RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 IFT81Q8WYA0 676 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 FBXL8Q96CD0 374 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 MRRFQ96E11 262 aaKnown RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 HIST1H2AHQ96KK5 128 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 HIST1H2AJQ99878 128 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 MACROD1Q9BQ69 325 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 H2AFJQ9BTM1 129 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 ZNF71Q9NQZ8 489 aaPredicted RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 TXNDC16Q9P2K2 825 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 CTSFQ9UBX1 484 aa12.56□□□□□ -0.4
PRKDC-206ENST00000536429 NOVA2Q9UNW9 492 aaKnown RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 MRPS2Q9Y399 296 aaKnown RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 PTRH2Q9Y3E5 179 aaKnown RBP12.56□□□□□ -0.4
PRKDC-206ENST00000536429 FEZF1A0PJY2 475 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 MASP2O00187 686 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 FFAR3O14843 346 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 GPR42O15529 346 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 LCMT2O60294 686 aaKnown RBP12.55□□□□□ -0.4
PRKDC-206ENST00000536429 ONECUT2O95948 504 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 ENO2P09104 434 aaPredicted RBP12.55□□□□□ -0.4
PRKDC-206ENST00000536429 EZRP15311 586 aaKnown RBP12.55□□□□□ -0.4
PRKDC-206ENST00000536429 OTX2P32243 289 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 STX2P32856 288 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 BCL6P41182 706 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 PMS2P54278 862 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 AP1S2P56377 157 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 C19orf57Q0VDD7 668 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 ATP1A4Q13733 1029 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 NAA25Q14CX7 972 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 GRTP1Q5TC63 336 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 CAPN13Q6MZZ7 669 aaPredicted RBP12.55□□□□□ -0.4
PRKDC-206ENST00000536429 LCTLQ6UWM7 567 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 SHISA6Q6ZSJ9 500 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 OVCH1Q7RTY7 1134 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 THAP4Q8WY91 577 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 ABHD17AQ96GS6 310 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 DHRS4Q9BTZ2 278 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 PCBD2Q9H0N5 130 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 SLC25A18Q9H1K4 315 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 SPNS1Q9H2V7 528 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 POPDC3Q9HBV1 291 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 TMEM184CQ9NVA4 438 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 CTNNAL1Q9UBT7 734 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 GPN3Q9UHW5 284 aaPredicted RBP12.55□□□□□ -0.4
PRKDC-206ENST00000536429 TLK1Q9UKI8 766 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 OARD1Q9Y530 152 aa12.55□□□□□ -0.4
PRKDC-206ENST00000536429 HMX2A2RU54 273 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 FOXS1O43638 330 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 PDGFAP04085 211 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 CCDC166P0CW27 439 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 CD1DP15813 335 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 SLC12A2P55011 1212 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 MEF2AQ02078 507 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-206ENST00000536429 RELAQ04206 551 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 DLG1Q12959 904 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 BMPR2Q13873 1038 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 OR4D1Q15615 310 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 FAM214AQ32MH5 1076 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 FBXO48Q5FWF7 155 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 COLEC12Q5KU26 742 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 CATSPEREQ5SY80 951 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 YOD1Q5VVQ6 348 aaPredicted RBP12.54□□□□□ -0.4
PRKDC-206ENST00000536429 PPP1R32Q7Z5V6 425 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 MRGPREQ86SM8 312 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 C17orf64Q86WR6 236 aa12.54□□□□□ -0.4
PRKDC-206ENST00000536429 PTRH1Q86Y79 214 aaKnown RBP12.54□□□□□ -0.4
PRKDC-206ENST00000536429 OR2Y1Q8NGV0 311 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms