RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 PRG2P13727 222 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 PSMB4P28070 264 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 SLC6A6P31641 620 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 CDKN1AP38936 164 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 PITPNBP48739 271 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 GBX2P52951 348 aaPredicted RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 CDK3Q00526 305 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 KRT81Q14533 505 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 MELKQ14680 651 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 MVPQ14764 893 aaKnown RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 CCDC40Q4G0X9 1142 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 EPC2Q52LR7 807 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 LRRC73Q5JTD7 316 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.43□□□□□ -1.7
ATM-223ENST00000533979 NSUN5P2Q63ZY6 315 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 SIGIRRQ6IA17 410 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 ANKRD54Q6NXT1 300 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 AFTPHQ6ULP2 937 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 CCBE1Q6UXH8 406 aaPredicted RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 TPRG1Q6ZUI0 275 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 C15orf52Q6ZUT6 534 aaKnown RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 CREB3L2Q70SY1 520 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 ARMCX2Q7L311 632 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 CUZD1Q86UP6 607 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 FOXP4Q8IVH2 680 aaPredicted RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 CFAP206Q8IYR0 622 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 MIGA1Q8NAN2 632 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 NEXN-AS1Q8NBZ9 246 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 CLEC1AQ8NC01 280 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 CCNYQ8ND76 341 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 TBC1D16Q8TBP0 767 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 AP2M1Q96CW1 435 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 C14orf79Q96F83 325 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 CFAP53Q96M91 514 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 NSMCE2Q96MF7 247 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 PAIP2Q9BPZ3 127 aaKnown RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 ERP44Q9BS26 406 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 ZNF577Q9BSK1 485 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 THUMPD2Q9BTF0 503 aaKnown RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 MOV10L1Q9BXT6 1211 aaKnown RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 TEX13AQ9BXU3 409 aaPredicted RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 NPFFR1Q9GZQ6 430 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 TMEM39BQ9GZU3 492 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 RAD21L1Q9H4I0 556 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 ESRP2Q9H6T0 727 aaKnown RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 TBC1D17Q9HA65 648 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 FAM212BQ9NTI7 297 aaPredicted RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 CISD1Q9NZ45 108 aaKnown RBP4.43□□□□□ -1.7
ATM-223ENST00000533979 TBC1D7Q9P0N9 293 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 ANKMY1Q9P2S6 941 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 STK39Q9UEW8 545 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 KCNN3Q9UGI6 736 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 PRDM4Q9UKN5 801 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 TSPAN16Q9UKR8 245 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 RNF150Q9ULK6 438 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 GPR132Q9UNW8 380 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 SMC3Q9UQE7 1217 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 ARHGAP31Q2M1Z3 1444 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 SCN5AQ14524 2016 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 PZPP20742 1482 aa4.43□□□□□ -1.7
ATM-223ENST00000533979 DHX57Q6P158 1386 aaKnown RBP4.42□□□□□ -1.7
ATM-223ENST00000533979 LMTK2Q8IWU2 1503 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 TMEM221A6NGB7 291 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 ZSCAN5CA6NGD5 496 aaPredicted RBP4.42□□□□□ -1.7
ATM-223ENST00000533979 DUXAA6NLW8 204 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 TMEM110-MUSTN1A8MSY1 372 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 HEPACAM2A8MVW5 462 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 KLHL41O60662 606 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 TSC22D2O75157 780 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 PRDM1O75626 825 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 ACSL3O95573 720 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 AK1P00568 194 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 DAOP14920 347 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 CD22P20273 847 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 DNAJB1P25685 340 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 CASQ1P31415 396 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 DCTDP32321 178 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 COMPP49747 757 aaPredicted RBP4.42□□□□□ -1.7
ATM-223ENST00000533979 METAP2P50579 478 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATM-223ENST00000533979 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
ATM-223ENST00000533979 ERVFC1-1P60608 527 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 BNC1Q01954 994 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 FOLH1Q04609 750 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 PRKCZQ05513 592 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 FAM27E3Q08E93 113 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 NR1D2Q14995 579 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 CEBPEQ15744 281 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 MAPK11Q15759 364 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 MEP1AQ16819 746 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 UGP2Q16851 508 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 RABL6Q3YEC7 729 aaPredicted RBP4.42□□□□□ -1.7
ATM-223ENST00000533979 BOLA3Q53S33 107 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 SPOUT1Q5T280 376 aaKnown RBP4.42□□□□□ -1.7
ATM-223ENST00000533979 C9orf57Q5W0N0 161 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 GGNBP1Q5YKI7 109 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 KCTD11Q693B1 232 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 RAET1GQ6H3X3 334 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 OR6B2Q6IFH4 312 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 PRR27Q6MZM9 219 aa4.42□□□□□ -1.7
ATM-223ENST00000533979 NRKQ7Z2Y5 1582 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms