RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 KPNA5O15131 536 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 SORBS2O94875 1100 aaKnown RBP9.17□□□□□ -0.94
SSBP3-215ENST00000533946 KLHL18O94889 574 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 ONECUT2O95948 504 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 F10P00742 488 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 RPN2P04844 631 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 CDH1P12830 882 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 AGXTP21549 392 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 FDXRP22570 491 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 CCNFP41002 786 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 BCL6P41182 706 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 FOLR3P41439 243 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 CSRP3P50461 194 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 TAS2R39P59534 338 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 GPX6P59796 221 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 TBPL1P62380 186 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 CSNK1G2P78368 415 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 KLC1Q07866 573 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 KLRB1Q12918 225 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 NAE1Q13564 534 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 MORF4L2Q15014 288 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 EFTUD2Q15029 972 aaKnown RBP eCLIP9.17□□□□□ -0.944e-7■■■■■ 33.1
SSBP3-215ENST00000533946 HIF1AQ16665 826 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 CATSPEREQ5SY80 951 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 UGT3A1Q6NUS8 523 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 TTC23LQ6PF05 361 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 ZDHHC24Q6UX98 284 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 SYT10Q6XYQ8 523 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 TEX19Q8NA77 164 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 KCT2Q8NC54 265 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 OR9A4Q8NGU2 314 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 STT3BQ8TCJ2 826 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 PROKR1Q8TCW9 393 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 THAP4Q8WY91 577 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 ZUFSPQ96AP4 578 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 FOPNLQ96NB1 174 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 ZFYVE21Q9BQ24 234 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 PPANQ9NQ55 473 aaKnown RBP9.17□□□□□ -0.94
SSBP3-215ENST00000533946 UTP6Q9NYH9 597 aaKnown RBP9.17□□□□□ -0.94
SSBP3-215ENST00000533946 TRMT6Q9UJA5 497 aaKnown RBP9.17□□□□□ -0.94
SSBP3-215ENST00000533946 MTO1Q9Y2Z2 717 aaKnown RBP9.17□□□□□ -0.94
SSBP3-215ENST00000533946 ESYT3A0FGR9 886 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 NPEPPSL1A6NEC2 478 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 ZNF860A6NHJ4 632 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 E7ESA3 106 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 PRAMEF4O60810 478 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 GUCA1CO95843 209 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 CATP04040 527 aaKnown RBP9.16□□□□□ -0.94
SSBP3-215ENST00000533946 HBQ1P09105 142 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SFTPCP11686 197 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 NPPBP16860 134 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 GNLYP22749 145 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 CMPK1P30085 196 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 KCNC1P48547 511 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 PGDP52209 483 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SLC7A5Q01650 507 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 EEF1A2Q05639 463 aaKnown RBP9.16□□□□□ -0.94
SSBP3-215ENST00000533946 MRPL49Q13405 166 aaKnown RBP9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SSPNQ14714 243 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 GRM7Q14831 915 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 PRAMEF9Q5VWM5 478 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SLC6A19Q695T7 634 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 ADNP2Q6IQ32 1131 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 JMJD6Q6NYC1 403 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-215ENST00000533946 CYB5D1Q6P9G0 228 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 AGTRAPQ6RW13 159 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SBSNQ6UWP8 590 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 NEK10Q6ZWH5 1172 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 ADCK2Q7Z695 626 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 GALNT16Q8N428 558 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 CSNK1A1LQ8N752 337 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 FBXO15Q8NCQ5 510 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-215ENST00000533946 CATSPER1Q8NEC5 780 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SPATA4Q8NEY3 305 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 OR11G2Q8NGC1 345 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 OR5T3Q8NGG3 340 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 ZCCHC10Q8TBK6 192 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 COL26A1Q96A83 441 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 ESAMQ96AP7 390 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SLC22A18Q96BI1 424 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 PTERQ96BW5 349 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 SNF8Q96H20 258 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 TSNARE1Q96NA8 513 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 FAM167BQ9BTA0 163 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 ENAMQ9NRM1 1142 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 MOCS1Q9NZB8 636 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 GPN3Q9UHW5 284 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-215ENST00000533946 CDC23Q9UJX2 597 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 VWA7Q9Y334 891 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 ASB1Q9Y576 335 aa9.16□□□□□ -0.94
SSBP3-215ENST00000533946 NAV2Q8IVL1 2488 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ICE1Q9Y2F5 2266 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 CLEC18AA5D8T8 446 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 F8W8V4 182 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 SGK494L7N484 410 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 PHGDHO43175 533 aaKnown RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 MAP3K7O43318 606 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ZBTB14O43829 449 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 VPS26AO75436 327 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 WISP3O95389 354 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms