RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 RUVBL1Q9Y265 456 aaKnown RBP9.96□□□□□ -0.82
CAPN1-225ENST00000533704 PCDHGB7Q9Y5F8 929 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 KLK4Q9Y5K2 254 aa9.96□□□□□ -0.82
CAPN1-225ENST00000533704 EFCAB8A8MWE9 144 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 H7BY64 318 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 CCDC188H7C350 402 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 AHSGP02765 367 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 ALPPP05187 535 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 C8GP07360 202 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 ANXA5P08758 320 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 EZRP15311 586 aaKnown RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 MMP11P24347 488 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 SKIV2L2P42285 1042 aaKnown RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 TBPL1P62380 186 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 ABATP80404 500 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 TIAL1Q01085 375 aaKnown RBP eCLIP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PDIA2Q13087 525 aaKnown RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 MYBPC3Q14896 1274 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PRTGQ2VWP7 1150 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PRR30Q53SZ7 412 aaPredicted RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 SLC6A19Q695T7 634 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 ZNF425Q6IV72 752 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 LRRC8EQ6NSJ5 796 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 HIBCHQ6NVY1 386 aaPredicted RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 JMJD6Q6NYC1 403 aaPredicted RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PRMT9Q6P2P2 845 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 CAPN12Q6ZSI9 719 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 KIAA0408Q6ZU52 694 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 RBMXL3Q8N7X1 1067 aaKnown RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 STT3BQ8TCJ2 826 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 MIEF2Q96C03 454 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 MMABQ96EY8 250 aaPredicted RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PDLIM2Q96JY6 352 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PRAP1Q96NZ9 151 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 SMAD5Q99717 465 aaKnown RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 SLC26A1Q9H2B4 701 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 SYNPO2LQ9H987 977 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 TRPC4Q9UBN4 977 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 ZNF282Q9UDV7 671 aaPredicted RBP9.95□□□□□ -0.82
CAPN1-225ENST00000533704 CDC14AQ9UNH5 594 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 PDE10AQ9Y233 779 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 SNX24Q9Y343 169 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 HS3ST3B1Q9Y662 390 aa9.95□□□□□ -0.82
CAPN1-225ENST00000533704 SPTBN1Q01082 2364 aaKnown RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 A0A0A6YYC8 382 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 I3L1I5 382 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 EIF3FO00303 357 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 SOCS6O14544 535 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 MAP2K7O14733 419 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 P2RX6O15547 441 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 PRPF4O43172 522 aaKnown RBP eCLIP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 VPS4BO75351 444 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 SEC31AO94979 1220 aaKnown RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 ONECUT2O95948 504 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 HIST1H2AGP0C0S8 130 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 ZGLP1P0C6A0 271 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 HIST1H2ADP20671 130 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 RPL21P46778 160 aaKnown RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 UQCRFS1P47985 274 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 IL2P60568 153 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 KLC1Q07866 573 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 AIMP2Q13155 320 aaKnown RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 NAE1Q13564 534 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 PHKG1Q16816 387 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 TUBB8Q3ZCM7 444 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 VWA2Q5GFL6 755 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 TEDDM1Q5T9Z0 273 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 HECTD2Q5U5R9 776 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 FAAH2Q6GMR7 532 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 AGTRAPQ6RW13 159 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 KIRREL2Q6UWL6 708 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 C17orf64Q86WR6 236 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 CNTN4Q8IWV2 1026 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 LRRC56Q8IYG6 542 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 C17orf53Q8N3J3 647 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 FBXO36Q8NEA4 188 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 C8orf44Q96CB5 159 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 VPS50Q96JG6 964 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 HIST1H2AHQ96KK5 128 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 CCDC138Q96M89 665 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 OR2A5Q96R48 311 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 HIST1H2AJQ99878 128 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 MESP1Q9BRJ9 268 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 WDR83Q9BRX9 315 aaKnown RBP9.94□□□□□ -0.82
CAPN1-225ENST00000533704 H2AFJQ9BTM1 129 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 DPH5Q9H2P9 285 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 PARVBQ9HBI1 364 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 PLAC1Q9HBJ0 212 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 SEMA3GQ9NS98 782 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 ARL15Q9NXU5 204 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 ZFATQ9P243 1243 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 C3orf18Q9UK00 162 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 VPS4AQ9UN37 437 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 SH2B3Q9UQQ2 575 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 TEX264Q9Y6I9 313 aa9.94□□□□□ -0.82
CAPN1-225ENST00000533704 SPTAN1Q13813 2472 aaKnown RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 HIVEP3Q5T1R4 2406 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 FEZF1A0PJY2 475 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 VSTM2BA6NLU5 285 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms