RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OR2A5Q96R48 311 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 ERP44Q9BS26 406 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 NUDT9Q9BW91 350 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 TRIM54Q9BYV2 358 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 SOX17Q9H6I2 414 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-204ENST00000532550 ATP13A2Q9NQ11 1180 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 TMEM184CQ9NVA4 438 aa16.44■□□□□ 0.22
PHRF1-204ENST00000532550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
PHRF1-204ENST00000532550 AGPSO00116 658 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 TP73O15350 636 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 DPM1O60762 260 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 MED26O95402 600 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 CCND1P24385 295 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 RAPSNQ13702 412 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 IGFBP7Q16270 282 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 HKDC1Q2TB90 917 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 GARNL3Q5VVW2 1013 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 PRAMEF13Q5VWM6 474 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 AGTRAPQ6RW13 159 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 SHISA6Q6ZSJ9 500 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 ZBED8Q8IZ13 594 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 GALNT16Q8N428 558 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 DTWD1Q8N5C7 304 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 ALKBH8Q96BT7 664 aaKnown RBP16.43■□□□□ 0.22
PHRF1-204ENST00000532550 VPS50Q96JG6 964 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 SPSB2Q99619 263 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 WDR83Q9BRX9 315 aaKnown RBP16.43■□□□□ 0.22
PHRF1-204ENST00000532550 YIPF2Q9BWQ6 316 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 ATG10Q9H0Y0 220 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 DPH5Q9H2P9 285 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 SEMA3GQ9NS98 782 aa16.43■□□□□ 0.22
PHRF1-204ENST00000532550 CUEDC1Q9NWM3 386 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-204ENST00000532550 ZNF282Q9UDV7 671 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-204ENST00000532550 RUVBL1Q9Y265 456 aaKnown RBP16.43■□□□□ 0.22
PHRF1-204ENST00000532550 RP1L1Q8IWN7 2480 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-204ENST00000532550 VSTM2BA6NLU5 285 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 TTLL8A6PVC2 850 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 E7ESA3 106 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 HAT1O14929 419 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 PRPF4O43172 522 aaKnown RBP eCLIP16.42■□□□□ 0.22
PHRF1-204ENST00000532550 SAT1P21673 171 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 FBLP22087 321 aaKnown RBP16.42■□□□□ 0.22
PHRF1-204ENST00000532550 FDXRP22570 491 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 MLLT10P55197 1068 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 TBPL1P62380 186 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 ETF1P62495 437 aaKnown RBP16.42■□□□□ 0.22
PHRF1-204ENST00000532550 FOXK1P85037 733 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 NAE1Q13564 534 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 FASTKD3Q14CZ7 662 aaKnown RBP16.42■□□□□ 0.22
PHRF1-204ENST00000532550 STRA8Q7Z7C7 330 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 PLD3Q8IV08 490 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 TMEM151BQ8IW70 566 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 STT3BQ8TCJ2 826 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 PYROXD1Q8WU10 500 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 MIEF2Q96C03 454 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 MVB12AQ96EY5 273 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 C10orf90Q96M02 699 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 SMAD5Q99717 465 aaKnown RBP16.42■□□□□ 0.22
PHRF1-204ENST00000532550 ARL15Q9NXU5 204 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 NSMCE4AQ9NXX6 385 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 MOCS1Q9NZB8 636 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 WHRNQ9P202 907 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 C5AR2Q9P296 337 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 CTSFQ9UBX1 484 aa16.42■□□□□ 0.22
PHRF1-204ENST00000532550 FLNBO75369 2602 aaKnown RBP16.41■□□□□ 0.22
PHRF1-204ENST00000532550 ALPPP05187 535 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 ANXA5P08758 320 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 ZGLP1P0C6A0 271 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 PGGT1BP53609 377 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 AP1S2P56377 157 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 RPS15AP62244 130 aaKnown RBP16.41■□□□□ 0.22
PHRF1-204ENST00000532550 AIMP2Q13155 320 aaKnown RBP16.41■□□□□ 0.22
PHRF1-204ENST00000532550 CBLBQ13191 982 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 MYBPC3Q14896 1274 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 RBBP7Q16576 425 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 NDUFA9Q16795 377 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 PHKG1Q16816 387 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 NADK2Q4G0N4 442 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 CAPN13Q6MZZ7 669 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-204ENST00000532550 SYT10Q6XYQ8 523 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 MBOAT1Q6ZNC8 495 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 SLC26A11Q86WA9 606 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 C17orf64Q86WR6 236 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 C17orf53Q8N3J3 647 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-204ENST00000532550 MMABQ96EY8 250 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-204ENST00000532550 PDLIM5Q96HC4 596 aaKnown RBP16.41■□□□□ 0.22
PHRF1-204ENST00000532550 OLFM1Q99784 485 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 CRB3Q9BUF7 120 aa16.41■□□□□ 0.22
PHRF1-204ENST00000532550 PCSK5Q92824 1860 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 KCNE1BA0A087WTH5 132 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 SOCS6O14544 535 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 RAD51CO43502 376 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 TSPAN12O95859 305 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 GRK3P35626 688 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 SOX8P57073 446 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 KLC1Q07866 573 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 C2orf54Q08AI8 447 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 VWA2Q5GFL6 755 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 VWA5B1Q5TIE3 1220 aa16.4■□□□□ 0.22
PHRF1-204ENST00000532550 DUPD1Q68J44 220 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms