RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 AKAP9Q99996 3911 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 A0A0A6YYC8 382 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 A0A1W2PQ72 361 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 I3L1I5 382 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 MYO1CO00159 1063 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 P2RX6O15547 441 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 FOXS1O43638 330 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 WFS1O76024 890 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 BMP10O95393 424 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 WDPCPO95876 746 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 STATHP02808 62 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 F7P08709 466 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 CHRM3P20309 590 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 GRNP28799 593 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 ATP5DP30049 168 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 SLC26A3P40879 764 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 TERF1P54274 439 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 EMP3P54852 163 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 SNRPNP63162 240 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 MAT1AQ00266 395 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 GTF3C1Q12789 2109 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 NAA25Q14CX7 972 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 PCOLCEQ15113 449 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 KLHL38Q2WGJ6 581 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 ICE2Q659A1 982 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 MRNIPQ6NTE8 343 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 GFRALQ6UXV0 394 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 SDCCAG8Q86SQ7 713 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 HAS2Q92819 552 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 RELTQ969Z4 430 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 OR2A5Q96R48 311 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 PKP4Q99569 1192 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 KIFC1Q9BW19 673 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 C14orf105Q9NVL8 296 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 RIC8BQ9NVN3 520 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 GUCA1BQ9UMX6 200 aa17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 NCOA6Q14686 2063 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-206ENST00000531405 TCRBV7S3A2A0A539 114 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 PRPF4O43172 522 aaKnown RBP eCLIP17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 PSIP1O75475 530 aaKnown RBP17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 ANXA5P08758 320 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 FDXRP22570 491 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 MST1P26927 711 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 PNLIPRP1P54315 467 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 KCNJ11Q14654 390 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 INAQ16352 499 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 CCNG2Q16589 344 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 RNF187Q5TA31 235 aaPredicted RBP17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 ZNF425Q6IV72 752 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 HIBCHQ6NVY1 386 aaPredicted RBP17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 PLD3Q8IV08 490 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 ZC3H7AQ8IWR0 971 aaKnown RBP17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 SHISA5Q8N114 240 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 ARHGEF39Q8N4T4 335 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 RNF10Q8N5U6 811 aaKnown RBP17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 MVB12AQ96EY5 273 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 SLC30A3Q99726 388 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 MKKSQ9NPJ1 570 aaPredicted RBP17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 PCYOX1Q9UHG3 505 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 MKL2Q9ULH7 1088 aa17.48■□□□□ 0.39
SSSCA1-206ENST00000531405 POLQO75417 2590 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 LOC102723996A0A087X1L8 192 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 TRGV8A0A0C4DH27 118 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 H3BMM5 538 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 HAT1O14929 419 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 PHF2O75151 1096 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 UNC5CO95185 931 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 SLC16A8O95907 504 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 ESR1P03372 595 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 KCNJ1P48048 391 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 PRDX1Q06830 199 aaKnown RBP17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 NAA30Q147X3 362 aaPredicted RBP17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 GSTA5Q7RTV2 222 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 ADCK2Q7Z695 626 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 MCEMP1Q8IX19 187 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 ITLN2Q8WWU7 325 aaPredicted RBP17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 RERGQ96A58 199 aaPredicted RBP17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 TGIF2Q9GZN2 237 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 DRC3Q9H069 523 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 ZNF700Q9H0M5 742 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 FAM114A2Q9NRY5 505 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 SOX13Q9UN79 622 aa17.47■□□□□ 0.39
SSSCA1-206ENST00000531405 IGHV3-20A0A0C4DH32 117 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 E5RI56 91 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 AVILO75366 819 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 CATP04040 527 aaKnown RBP17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 EZRP15311 586 aaKnown RBP17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 PMP22Q01453 160 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 CUL1Q13616 776 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 ARHGAP19Q14CB8 494 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 RPS6KA1Q15418 735 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 MEI1Q5TIA1 1274 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 GARNL3Q5VVW2 1013 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 TMEM205Q6UW68 189 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 RIPOR1Q6ZS17 1223 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 NEK10Q6ZWH5 1172 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 CENPUQ71F23 418 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 REXO1L1PQ8IX06 675 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 SPC24Q8NBT2 197 aa17.46■□□□□ 0.39
SSSCA1-206ENST00000531405 GIMAP7Q8NHV1 300 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms