RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 GRIA3P42263 894 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 VSX2P58304 361 aaPredicted RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 AP1B1Q10567 949 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 PIGHQ14442 188 aaPredicted RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 KRT31Q15323 416 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 PCBP2Q15366 365 aaKnown RBP eCLIP7.76□□□□□ -1.17
CD44-232ENST00000531118 MEP1AQ16819 746 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 FAM214AQ32MH5 1076 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 DPCR1Q3MIW9 517 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 SIRPB2Q5JXA9 342 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 Q5PR19 223 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 TMEM205Q6UW68 189 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 UNC5DQ6UXZ4 953 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 TAX1BP1Q86VP1 789 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 TMTC1Q8IUR5 882 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 ZC3H7AQ8IWR0 971 aaKnown RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 TBC1D21Q8IYX1 336 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 CIARTQ8N365 385 aaPredicted RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 SLC25A41Q8N5S1 370 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 OR5K2Q8NHB8 316 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 ULK4Q96C45 1275 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 TRIM11Q96F44 468 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 BTBD6Q96KE9 485 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 COPS8Q99627 209 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 OLFM1Q99784 485 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 GLOD4Q9HC38 313 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 MRPL47Q9HD33 250 aaKnown RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 LUC7LQ9NQ29 371 aaKnown RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 INTS7Q9NVH2 962 aaKnown RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 BEX4Q9NWD9 120 aaPredicted RBP7.76□□□□□ -1.17
CD44-232ENST00000531118 TRPC4Q9UBN4 977 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 POLG2Q9UHN1 485 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 CBLCQ9ULV8 474 aa7.76□□□□□ -1.17
CD44-232ENST00000531118 IGHV3-20A0A0C4DH32 117 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 LOC285095A0A1B0GVY8 99 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 USP27XA6NNY8 438 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 AGAP14A8MT82 685 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 DDX3XO00571 662 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-232ENST00000531118 PRPF4O43172 522 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-232ENST00000531118 NRP2O60462 931 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 CDC40O60508 579 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-232ENST00000531118 CTSVO60911 334 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 SUN1O94901 812 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 AP2A1O95782 977 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 SP1P08047 785 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 C8orf89P0DMQ9 161 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 MYBL1P10243 752 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 ATP1B2P14415 290 aaPredicted RBP7.75□□□□□ -1.17
CD44-232ENST00000531118 TFEBP19484 476 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 KIR2DL3P43628 341 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 WNT3AP56704 352 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 NKX6-1P78426 367 aaPredicted RBP7.75□□□□□ -1.17
CD44-232ENST00000531118 XIAPP98170 497 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 OC90Q02509 493 aaPredicted RBP7.75□□□□□ -1.17
CD44-232ENST00000531118 PLAURQ03405 335 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 TAZQ16635 292 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 MUM1Q2TAK8 710 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 BTBD16Q32M84 506 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 FLYWCH1Q4VC44 716 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 CMPK2Q5EBM0 449 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 EMC4Q5J8M3 183 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 WASHC2DQ5SRD0 308 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 PLAG1Q6DJT9 500 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 FRMPD2BQ6IN97 320 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 SLC25A25Q6KCM7 469 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 H3F3CQ6NXT2 135 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 ZNF449Q6P9G9 518 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 FIGLAQ6QHK4 219 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 LANCL3Q6ZV70 420 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 ACAD11Q709F0 780 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 RNF44Q7L0R7 432 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 PLD5Q8N7P1 536 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 AMER3Q8N944 861 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 LMNTD1Q8N9Z9 388 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 LINC01555Q8NAE3 123 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 OR5M3Q8NGP4 307 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 FICDQ9BVA6 458 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 THAP2Q9H0W7 228 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.75□□□□□ -1.17
CD44-232ENST00000531118 STOX2Q9P2F5 926 aaPredicted RBP7.75□□□□□ -1.17
CD44-232ENST00000531118 TRPS1Q9UHF7 1281 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 FAM153AQ9UHL3 310 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 ANAPC7Q9UJX3 599 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 ALG6Q9Y672 507 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 ARL5AQ9Y689 179 aa7.75□□□□□ -1.17
CD44-232ENST00000531118 IGLV3-16A0A075B6K0 115 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 LIN7AO14910 233 aaPredicted RBP7.74□□□□□ -1.17
CD44-232ENST00000531118 SMAD7O15105 426 aaKnown RBP7.74□□□□□ -1.17
CD44-232ENST00000531118 HS6ST1O60243 411 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 KDM1AO60341 852 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 FTLP02792 175 aaPredicted RBP7.74□□□□□ -1.17
CD44-232ENST00000531118 CCDC172P0C7W6 258 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 ERVK-10P10266 1014 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 CD53P19397 219 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 ITGALP20701 1170 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 PTPN3P26045 913 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 ACADLP28330 430 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 CD68P34810 354 aaPredicted RBP7.74□□□□□ -1.17
CD44-232ENST00000531118 RFC3P40938 356 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 SSR1P43307 286 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms