RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 GSPT2Q8IYD1 628 aaKnown RBP17.89■□□□□ 0.45
GMDS-208ENST00000530927 OR56A3Q8NH54 315 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 PTERQ96BW5 349 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 FBXL8Q96CD0 374 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 OR2A5Q96R48 311 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 ARHGAP9Q9BRR9 750 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 NLNQ9BYT8 704 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 ANKZF1Q9H8Y5 726 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 POPDC3Q9HBV1 291 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 CTNNAL1Q9UBT7 734 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 TCFL5Q9UL49 500 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 SRPK3Q9UPE1 567 aa17.89■□□□□ 0.45
GMDS-208ENST00000530927 MDC1Q14676 2089 aaKnown RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 HYKKA2RU49 373 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 FITM1A5D6W6 292 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 NCF1BA6NI72 391 aaPredicted RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 NCF1CA8MVU1 366 aaPredicted RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 NCF1P14598 390 aaPredicted RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 NPPBP16860 134 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 STMN1P16949 149 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 AGXTP21549 392 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 SPRP35270 261 aaPredicted RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 AP1S2P56377 157 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 RAB10P61026 200 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 CSNK1G2P78368 415 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 ABATP80404 500 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 DCDP81605 110 aaKnown RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 MEF2AQ02078 507 aaPredicted RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 CHAF1BQ13112 559 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 GRM7Q14831 915 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 OR4D1Q15615 310 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 SHISA5Q8N114 240 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 EIF1ADQ8N9N8 165 aaKnown RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 TSNARE1Q96NA8 513 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 IFT80Q9P2H3 777 aaPredicted RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 ANKMY1Q9P2S6 941 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.88■□□□□ 0.45
GMDS-208ENST00000530927 SNX7Q9UNH6 387 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 RUVBL1Q9Y265 456 aaKnown RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 OARD1Q9Y530 152 aa17.88■□□□□ 0.45
GMDS-208ENST00000530927 V9GYY5 206 aaPredicted RBP17.88■□□□□ 0.45
GMDS-208ENST00000530927 A0A1B0GX78 115 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 FFAR3O14843 346 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 GPR42O15529 346 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 SRPX2O60687 465 aaPredicted RBP17.87■□□□□ 0.45
GMDS-208ENST00000530927 KLF7O75840 302 aaPredicted RBP17.87■□□□□ 0.45
GMDS-208ENST00000530927 DNAJB5O75953 348 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 ENO2P09104 434 aaPredicted RBP17.87■□□□□ 0.45
GMDS-208ENST00000530927 RAB40ALP0C0E4 278 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 SLC35E2BP0CK96 405 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 CD1DP15813 335 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 POLE2P56282 527 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 IRF9Q00978 393 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 MC1RQ01726 317 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 CSHL1Q14406 222 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 PRTGQ2VWP7 1150 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 TCTE1Q5JU00 501 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 MROH9Q5TGP6 573 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 CPZQ66K79 652 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 SYVN1Q86TM6 617 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 RELL1Q8IUW5 271 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 CSNK1A1LQ8N752 337 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 TTC29Q8NA56 475 aaPredicted RBP17.87■□□□□ 0.45
GMDS-208ENST00000530927 PROKR1Q8TCW9 393 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 TSPAN17Q96FV3 270 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 TRIM54Q9BYV2 358 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 DERL2Q9GZP9 239 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 TSPYL1Q9H0U9 437 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 SPNS1Q9H2V7 528 aa17.87■□□□□ 0.45
GMDS-208ENST00000530927 NOVA2Q9UNW9 492 aaKnown RBP17.87■□□□□ 0.45
GMDS-208ENST00000530927 MRPS2Q9Y399 296 aaKnown RBP17.87■□□□□ 0.45
GMDS-208ENST00000530927 PABPN1LA6NDY0 278 aaKnown RBP17.86■□□□□ 0.45
GMDS-208ENST00000530927 C9J4A7 227 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 DSCR3O14972 297 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 LCMT2O60294 686 aaKnown RBP17.86■□□□□ 0.45
GMDS-208ENST00000530927 FAM153BP0C7A2 387 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 EZRP15311 586 aaKnown RBP17.86■□□□□ 0.45
GMDS-208ENST00000530927 TNFRSF8P28908 595 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 BCL6P41182 706 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 GDF5P43026 501 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 KCNC1P48547 511 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 UGT8Q16880 541 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 FAM153CQ494X1 144 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 CRTC2Q53ET0 693 aaPredicted RBP17.86■□□□□ 0.45
GMDS-208ENST00000530927 CATSPEREQ5SY80 951 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 CAPN13Q6MZZ7 669 aaPredicted RBP17.86■□□□□ 0.45
GMDS-208ENST00000530927 LCTLQ6UWM7 567 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 SHISA6Q6ZSJ9 500 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 CEP128Q6ZU80 1094 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 RAPH1Q70E73 1250 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 VN1R4Q7Z5H5 301 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 C17orf64Q86WR6 236 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 ADAMTS17Q8TE56 1095 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 ESAMQ96AP7 390 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 EGFL8Q99944 293 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 DPH2Q9BQC3 489 aaPredicted RBP17.86■□□□□ 0.45
GMDS-208ENST00000530927 TRIM55Q9BYV6 548 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 ACSS3Q9H6R3 686 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 CTSFQ9UBX1 484 aa17.86■□□□□ 0.45
GMDS-208ENST00000530927 KCNMB2Q9Y691 235 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms