RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 GRTP1Q5TC63 336 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 MRPL14Q6P1L8 145 aaKnown RBP16.31■□□□□ 0.2
CCS-205ENST00000530384 SBSNQ6UWP8 590 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 ADAMTSL2Q86TH1 951 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 C17orf64Q86WR6 236 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 RAB43Q86YS6 212 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 APLFQ8IW19 511 aaPredicted RBP16.31■□□□□ 0.2
CCS-205ENST00000530384 CEP97Q8IW35 865 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 PPM1NQ8N819 430 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 CEP112Q8N8E3 955 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 ADAMTS17Q8TE56 1095 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 FKBP10Q96AY3 582 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 PRAP1Q96NZ9 151 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 OR2A5Q96R48 311 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 HAUS8Q9BT25 410 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 SLC25A18Q9H1K4 315 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 DMGDHQ9UI17 866 aaKnown RBP16.31■□□□□ 0.2
CCS-205ENST00000530384 PIEZO2Q9H5I5 2752 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 BAHCC1Q9P281 2608 aa16.31■□□□□ 0.2
CCS-205ENST00000530384 HAT1O14929 419 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 RFPL1O75677 317 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 KLF7O75840 302 aaPredicted RBP16.3■□□□□ 0.2
CCS-205ENST00000530384 ALBP02768 609 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 STMN1P16949 149 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 CDKL1Q00532 357 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 SSPNQ14714 243 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 SLC9A5Q14940 896 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 PPP1R3AQ16821 1122 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 PRTGQ2VWP7 1150 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 PRMT9Q6P2P2 845 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 CSNK1A1LQ8N752 337 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 OR2Y1Q8NGV0 311 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 OR56A3Q8NH54 315 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 ALKBH8Q96BT7 664 aaKnown RBP16.3■□□□□ 0.2
CCS-205ENST00000530384 IP6K3Q96PC2 410 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 DERL2Q9GZP9 239 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 CTNNAL1Q9UBT7 734 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 IKZF3Q9UKT9 509 aa16.3■□□□□ 0.2
CCS-205ENST00000530384 PTRH2Q9Y3E5 179 aaKnown RBP16.3■□□□□ 0.2
CCS-205ENST00000530384 NPEPPSL1A6NEC2 478 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 MKRN2OSH3BPM6 223 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 CDC7O00311 574 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 GUCA1CO95843 209 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 ANXA5P08758 320 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 ATXN8OSP0DMR3 200 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 NPPBP16860 134 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 ITGAXP20702 1163 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 PHBP35232 272 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 GRK3P35626 688 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 RPS15AP62244 130 aaKnown RBP16.29■□□□□ 0.2
CCS-205ENST00000530384 GARNL3Q5VVW2 1013 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 FRA10AC1Q70Z53 315 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 OVCH1Q7RTY7 1134 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 RELL1Q8IUW5 271 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 C9orf43Q8TAL5 461 aaPredicted RBP16.29■□□□□ 0.2
CCS-205ENST00000530384 ANKRD49Q8WVL7 239 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 PTERQ96BW5 349 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 THAP11Q96EK4 314 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 MVB12AQ96EY5 273 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 CABS1Q96KC9 395 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 SLC26A1Q9H2B4 701 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 WDR54Q9H977 334 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 CAB39LQ9H9S4 337 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 SLC22A11Q9NSA0 550 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 NXT1Q9UKK6 140 aaKnown RBP16.29■□□□□ 0.2
CCS-205ENST00000530384 OARD1Q9Y530 152 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 FASNP49327 2511 aaKnown RBP16.29■□□□□ 0.2
CCS-205ENST00000530384 ATMQ13315 3056 aa16.29■□□□□ 0.2
CCS-205ENST00000530384 KCNE1BA0A087WTH5 132 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 B8ZZF3 427 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
CCS-205ENST00000530384 HNMTP50135 292 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 RAB10P61026 200 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 CSNK1G2P78368 415 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 NFATC3Q12968 1075 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 ZKSCAN8Q15776 578 aaPredicted RBP16.28■□□□□ 0.2
CCS-205ENST00000530384 ZXDCQ2QGD7 858 aaPredicted RBP16.28■□□□□ 0.2
CCS-205ENST00000530384 FAM69BQ5VUD6 431 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 TMEM102Q8N9M5 508 aaPredicted RBP16.28■□□□□ 0.2
CCS-205ENST00000530384 IFT81Q8WYA0 676 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 PYCR2Q96C36 320 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 ABHD17AQ96GS6 310 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 C10orf90Q96M02 699 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 EGFL8Q99944 293 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 ZNF304Q9HCX3 659 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 ACSS2Q9NR19 701 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 CDC14AQ9UNH5 594 aa16.28■□□□□ 0.2
CCS-205ENST00000530384 RUVBL1Q9Y265 456 aaKnown RBP16.28■□□□□ 0.2
CCS-205ENST00000530384 MED13Q9UHV7 2174 aa16.27■□□□□ 0.2
CCS-205ENST00000530384 SPTA1P02549 2419 aa16.27■□□□□ 0.2
CCS-205ENST00000530384 ARGFXA6NJG6 315 aa16.27■□□□□ 0.2
CCS-205ENST00000530384 PRPF4O43172 522 aaKnown RBP eCLIP16.27■□□□□ 0.27e-7■■■■□ 22.1
CCS-205ENST00000530384 PHGDHO43175 533 aaKnown RBP16.27■□□□□ 0.2
CCS-205ENST00000530384 CNOT3O75175 753 aaKnown RBP16.27■□□□□ 0.2
CCS-205ENST00000530384 CCDC166P0CW27 439 aa16.27■□□□□ 0.2
CCS-205ENST00000530384 CDH1P12830 882 aa16.27■□□□□ 0.2
CCS-205ENST00000530384 OTX2P32243 289 aa16.27■□□□□ 0.2
CCS-205ENST00000530384 OR1D4P47884 311 aa16.27■□□□□ 0.2
CCS-205ENST00000530384 RRADP55042 308 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms