RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 IFNKQ9P0W0 207 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 STOX2Q9P2F5 926 aaPredicted RBP8.53□□□□□ -1.04
VPS11-203ENST00000529545 C19orf25Q9UFG5 118 aaPredicted RBP8.53□□□□□ -1.04
VPS11-203ENST00000529545 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 PPT2Q9UMR5 302 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 NPIPA1Q9UND3 350 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 KLK4Q9Y5K2 254 aa8.53□□□□□ -1.04
VPS11-203ENST00000529545 CCDC162PA2VCL2 907 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 OR51F1A6NGY5 319 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 E9PLN8 166 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 H0YGG7 62 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 TXNDC9O14530 226 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 FFAR3O14843 346 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 GPR42O15529 346 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 PSMD3O43242 534 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 WIPF1O43516 503 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 ASNA1O43681 348 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 OR1I1O60431 355 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 PHF2O75151 1096 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 GPC4O75487 556 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 SUN1O94901 812 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 C8orf89P0DMQ9 161 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 PSMB5P28074 263 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 CCR7P32248 378 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 FOXN2P32314 431 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 SLC26A3P40879 764 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 CCNFP41002 786 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 ARF3P61204 181 aaPredicted RBP8.52□□□□□ -1.05
VPS11-203ENST00000529545 TRIM14Q14142 442 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 GRB7Q14451 532 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 PCOLCEQ15113 449 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 CDSNQ15517 529 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 PARP6Q2NL67 630 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 BTBD16Q32M84 506 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 FASTKD1Q53R41 847 aaKnown RBP8.52□□□□□ -1.05
VPS11-203ENST00000529545 ACER2Q5QJU3 275 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 GARNL3Q5VVW2 1013 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 AFTPHQ6ULP2 937 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 TMEM205Q6UW68 189 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 MICALCLQ6ZW33 695 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 RNF44Q7L0R7 432 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 LINC00523Q86TU6 105 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 LUZP1Q86V48 1076 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 VRK3Q8IV63 474 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 BEST3Q8N1M1 668 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 TAB3Q8N5C8 712 aaPredicted RBP8.52□□□□□ -1.05
VPS11-203ENST00000529545 CSNK1A1LQ8N752 337 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPS11-203ENST00000529545 CHDHQ8NE62 594 aaPredicted RBP8.52□□□□□ -1.05
VPS11-203ENST00000529545 AGAP11Q8TF27 550 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 RERGQ96A58 199 aaPredicted RBP8.52□□□□□ -1.05
VPS11-203ENST00000529545 IMMP1LQ96LU5 166 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 C10orf90Q96M02 699 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 VKORC1Q9BQB6 163 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 DPH7Q9BTV6 452 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 NHEJ1Q9H9Q4 299 aaPredicted RBP8.52□□□□□ -1.05
VPS11-203ENST00000529545 KCNK13Q9HB14 408 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 ANAPC5Q9UJX4 755 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 TTC7AQ9ULT0 858 aaPredicted RBP8.52□□□□□ -1.05
VPS11-203ENST00000529545 EFR3BQ9Y2G0 817 aa8.52□□□□□ -1.05
VPS11-203ENST00000529545 AKAP9Q99996 3911 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 OR2A25A4D2G3 310 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 MROH6A6NGR9 719 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 KPNA5O15131 536 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 WISP2O76076 250 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 SEC24DO94855 1032 aaPredicted RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 SLCO2B1O94956 709 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 PTMAP06454 111 aaKnown RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 CYC1P08574 325 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 BMP2P12643 396 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 PKMP14618 531 aaKnown RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 AOAHP28039 575 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 AVPR1BP47901 424 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 MARCKSL1P49006 195 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 OC90Q02509 493 aaPredicted RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 TUBA3CQ13748 450 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 OR1C1Q15619 314 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 NDUFA9Q16795 377 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 MEP1AQ16819 746 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 PRTGQ2VWP7 1150 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 P3H1Q32P28 736 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 AARS2Q5JTZ9 985 aaKnown RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 MFSD4BQ5TF39 518 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 CES4AQ5XG92 561 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 FCRLBQ6BAA4 426 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 PLAG1Q6DJT9 500 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 PTRHD1Q6GMV3 140 aaKnown RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 FBXO42Q6P3S6 717 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 LRRC8BQ6P9F7 803 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 TUBA3EQ6PEY2 450 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 CPEB2Q7Z5Q1 589 aaKnown RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 TMEM200AQ86VY9 491 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 AMER3Q8N944 861 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 DNAAF3Q8N9W5 541 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 OR2A1Q8NGT9 310 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 OR6P1Q8NGX9 317 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 OR4L1Q8NH43 312 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 HMGCLL1Q8TB92 370 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 ASB5Q8WWX0 329 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 HDAC10Q969S8 669 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms