RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 CLEC3AO75596 197 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 PDYNP01213 254 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 ITGB6P18564 788 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 GDF5P43026 501 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 EFNA3P52797 238 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 HNRNPKP61978 463 aaKnown RBP eCLIP7.53□□□□□ -1.2
SORL1-207ENST00000528339 HSPA14Q0VDF9 509 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 LRIF1Q5T3J3 769 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 IRAK1BP1Q5VVH5 260 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 ADNP2Q6IQ32 1131 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 PGM2L1Q6PCE3 622 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 FOXR1Q6PIV2 292 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 MCOLN3Q8TDD5 553 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 ZDHHC1Q8WTX9 485 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 C19orf60Q96EN9 201 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 TRAPPC9Q96Q05 1148 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 ILKAPQ9H0C8 392 aaPredicted RBP7.53□□□□□ -1.2
SORL1-207ENST00000528339 IPPKQ9H8X2 491 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 ATP6V1HQ9UI12 483 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 KCNK6Q9Y257 313 aa7.53□□□□□ -1.2
SORL1-207ENST00000528339 IGLV3-12A0A075B6K2 115 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 HCRTR1O43613 425 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 LCMT2O60294 686 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 NRP2O60462 931 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 CTSVO60911 334 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 RETP07949 1114 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 GUSBP08236 651 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 BCL6P41182 706 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 HLA-BQ31612 363 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 SPATA19Q7Z5L4 167 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 NET1Q7Z628 596 aaPredicted RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 FLCNQ8NFG4 579 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 OR7G3Q8NG95 312 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 SELENOSQ9BQE4 189 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 EFCAB11Q9BUY7 163 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 ASPSCR1Q9BZE9 553 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 EML4Q9HC35 981 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 FARSBQ9NSD9 589 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 SPASTQ9UBP0 616 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 APOBEC3BQ9UH17 382 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 SLC22A14Q9Y267 594 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 CLDN9O95484 217 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 CLPSP04118 112 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 THRAP10827 490 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 HGFP14210 728 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 TRA2BP62995 288 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 CSRP2Q16527 193 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PLA2G4EQ3MJ16 856 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 HHATQ5VTY9 493 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 SUSD1Q6UWL2 747 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 LAYNQ6UX15 382 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 GKN2Q86XP6 184 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 ANKRD42Q8N9B4 389 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 ZSCAN1Q8NBB4 408 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 OR6C4Q8NGE1 309 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PROKR1Q8TCW9 393 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 LRRC8CQ8TDW0 803 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 TRPC4APQ8TEL6 797 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 UTP4Q969X6 686 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 TEX37Q96LM6 180 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 CCDC68Q9H2F9 335 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 SEMA6CQ9H3T2 930 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 AKTIPQ9H8T0 292 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 CUEDC1Q9NWM3 386 aaPredicted RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 SLC6A14Q9UN76 642 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 WBP11Q9Y2W2 641 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 A0A1B0GVT2 93 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 A0A1W2PNU3 283 aaPredicted RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 A0A1W2PQM1 296 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 LNP1A1A4G5 178 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 C1orf226A1L170 272 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PIP5K1BO14986 540 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 FOXS1O43638 330 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 KATNA1O75449 491 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 JUNDP17535 347 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 PHC1P78364 1004 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 GSTA3Q16772 222 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 TCHHL1Q5QJ38 904 aaPredicted RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 C6orf136Q5SQH8 315 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PRAMEF14Q5SWL7 426 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 CATSPEREQ5SY80 951 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PRAMEF13Q5VWM6 474 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 ARMCX6Q7L4S7 300 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 CHST15Q7LFX5 561 aaPredicted RBP7.52□□□□□ -1.21
SORL1-207ENST00000528339 AMIGO1Q86WK6 493 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.52□□□□□ -1.21
SORL1-207ENST00000528339 PATE1Q8WXA2 126 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 DPYSL5Q9BPU6 564 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 ZIM2Q9NZV7 527 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 BCCIPQ9P287 314 aaKnown RBP eCLIP7.52□□□□□ -1.21
SORL1-207ENST00000528339 ASB4Q9Y574 426 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PCDHB11Q9Y5F2 797 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 PTGDR2Q9Y5Y4 395 aa7.52□□□□□ -1.21
SORL1-207ENST00000528339 LRIT2A6NDA9 550 aa7.51□□□□□ -1.21
SORL1-207ENST00000528339 OR4F21O95013 312 aa7.51□□□□□ -1.21
SORL1-207ENST00000528339 HOXB3P14651 431 aaPredicted RBP7.51□□□□□ -1.21
SORL1-207ENST00000528339 TPP2P29144 1249 aaPredicted RBP7.51□□□□□ -1.21
SORL1-207ENST00000528339 HNRNPH1P31943 449 aaKnown RBP7.51□□□□□ -1.21
SORL1-207ENST00000528339 MVDP53602 400 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms