RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ERN2Q76MJ5 926 aaKnown RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 TRMT1LQ7Z2T5 733 aaKnown RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 LONP2Q86WA8 852 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 SYCP3Q8IZU3 236 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 XXYLT1Q8NBI6 393 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 KIAA1524Q8TCG1 905 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 RNF139Q8WU17 664 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 KCNE4Q8WWG9 221 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 ERO1AQ96HE7 468 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 ABHD8Q96I13 439 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 CEP295NLQ96MC4 621 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 TESK2Q96S53 571 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 PAFAH2Q99487 392 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 PAIP2Q9BPZ3 127 aaKnown RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 RAB6CQ9H0N0 254 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 CHMP1AQ9HD42 196 aaPredicted RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 PLAGL1Q9UM63 463 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 TRAF3IP3Q9Y228 551 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 TMED5Q9Y3A6 229 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 ATP8B3O60423 1300 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 EVC2Q86UK5 1308 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 TULP4Q9NRJ4 1543 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 QRICH2Q9H0J4 1663 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 TCRBV21S2A2A0A5A6 115 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 TRBC2A0A5B9 178 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 OR2A25A4D2G3 310 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ZSCAN5CA6NGD5 496 aaPredicted RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 C15orf62A8K5M9 175 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 NDUFS4O43181 175 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 PAPSS1O43252 624 aaPredicted RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 GRID2O43424 1007 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 CTSVO60911 334 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 BAG4O95429 457 aaKnown RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 IFNB1P01574 187 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 IGHV4-39P01824 125 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 PRLRP16471 622 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 NR1D1P20393 614 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 MTIF2P46199 727 aaKnown RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 RABIFP47224 123 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ATP5OP48047 213 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ACTR1AP61163 376 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 BEX3Q00994 111 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 GAGE5Q13069 117 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 GAGE6Q13070 117 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ALCAMQ13740 583 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ANKRD20A4Q4UJ75 823 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 SLC39A12Q504Y0 691 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 FAM98BQ52LJ0 330 aaKnown RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 BOLA3Q53S33 107 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 HSP90AA5PQ58FG0 334 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ANKRD20A8PQ5CZ79 823 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ANKRD20A2Q5SQ80 823 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 NDUFAF5Q5TEU4 345 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ANKRD20A1Q5TYW2 823 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ANKRD20A3Q5VUR7 823 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 CST9LP1Q5W188 147 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 PACS1Q6VY07 963 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 PTOV1Q86YD1 416 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 DCUN1D3Q8IWE4 304 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 FBXW8Q8N3Y1 598 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 CCDC148Q8NFR7 591 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 TUBGCP3Q96CW5 907 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 GIMAP5Q96F15 307 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 COG3Q96JB2 828 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ST6GAL2Q96JF0 529 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 AGAP3Q96P47 875 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 UHRF2Q96PU4 802 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 NEK1Q96PY6 1258 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 FAM111AQ96PZ2 611 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 SLC25A23Q9BV35 468 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 CDK19Q9BWU1 502 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 RTN4RQ9BZR6 473 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 TRIM7Q9C029 511 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 DENND2DQ9H6A0 471 aaPredicted RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 ZNF334Q9HCZ1 680 aaPredicted RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 SLC35D1Q9NTN3 355 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 ABCB8Q9NUT2 735 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 CYP39A1Q9NYL5 469 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 WSB2Q9NYS7 404 aaPredicted RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 COX16Q9P0S2 106 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 FETUBQ9UGM5 382 aa5.45□□□□□ -1.54
PCF11-202ENST00000528336 PTBP2Q9UKA9 531 aaKnown RBP5.45□□□□□ -1.54
PCF11-202ENST00000528336 A0A0B4J293 547 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 A0A0G2JNG1 304 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 FAM172BPA6NC97 362 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 O00370 1275 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 VEGFDO43915 354 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 LETM1O95202 739 aaPredicted RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 ZWINTO95229 277 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 IGKV3-20P01619 116 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 ABCB1P08183 1280 aaPredicted RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 INHBAP08476 426 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 HSPA5P11021 654 aaKnown RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 ARF4P18085 180 aaPredicted RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 SP100P23497 879 aaPredicted RBP5.44□□□□□ -1.54
PCF11-202ENST00000528336 CCR10P46092 362 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 CAMLGP49069 296 aa5.44□□□□□ -1.54
PCF11-202ENST00000528336 KHKP50053 298 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms