RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CHRM3P20309 590 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 ALAS2P22557 587 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 FMO4P31512 558 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 MAGEA3P43357 314 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 FNTAP49354 379 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 VPS41P49754 854 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 FOXL2P58012 376 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 DHX34Q14147 1143 aaKnown RBP10.04□□□□□ -0.8
CPSF1-203ENST00000527916 ARHGAP19Q14CB8 494 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 NAA25Q14CX7 972 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 SF1Q15637 639 aaKnown RBP10.04□□□□□ -0.8
CPSF1-203ENST00000527916 RBBP7Q16576 425 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 DEFB110Q30KQ9 67 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 ANKRD22Q5VYY1 191 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 CASC4Q6P4E1 433 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 FIGLAQ6QHK4 219 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 KIRREL2Q6UWL6 708 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 NEK10Q6ZWH5 1172 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 OVCH1Q7RTY7 1134 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 OTUD6BQ8N6M0 293 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 NAT8LQ8N9F0 302 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 DNAJB8Q8NHS0 232 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 SERPINB12Q96P63 405 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 TAAR6Q96RI8 345 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 OSBPL9Q96SU4 736 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 SPOCK3Q9BQ16 436 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 SEMA3GQ9NS98 782 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 IL1RAPL1Q9NZN1 696 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.04□□□□□ -0.8
CPSF1-203ENST00000527916 ABI3Q9P2A4 366 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 NXT1Q9UKK6 140 aaKnown RBP10.04□□□□□ -0.8
CPSF1-203ENST00000527916 CRYL1Q9Y2S2 319 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 HS3ST3B1Q9Y662 390 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 NFS1Q9Y697 457 aa10.04□□□□□ -0.8
CPSF1-203ENST00000527916 GOLGA6L10A0A0M3HER8 536 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 FITM1A5D6W6 292 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 GOLGA8KD6RF30 607 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 GOLGA8TH3BQL2 631 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 PHF2O75151 1096 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 NIPSNAP2O75323 286 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 PSIP1O75475 530 aaKnown RBP10.03□□□□□ -0.8
CPSF1-203ENST00000527916 FAM155BO75949 473 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 USP1O94782 785 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 KLHL18O94889 574 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 CLDN14O95500 239 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 ERGP11308 486 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 HSD17B2P37059 387 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 GRIA3P42263 894 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 TNFSF10P50591 281 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 GRM7Q14831 915 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 FAM214AQ32MH5 1076 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 FAAH2Q6GMR7 532 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 FAM20CQ8IXL6 584 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 SLC35F6Q8N357 371 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 C2orf73Q8N5S3 287 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-203ENST00000527916 FBXO15Q8NCQ5 510 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-203ENST00000527916 OR2A1Q8NGT9 310 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 OR9A1PQ8NGU1 263 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 CALML6Q8TD86 181 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 SKA2Q8WVK7 121 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-203ENST00000527916 SLCO2A1Q92959 643 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 SIGLEC10Q96LC7 697 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 IL17FQ96PD4 163 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.03□□□□□ -0.8
CPSF1-203ENST00000527916 GRPEL1Q9HAV7 217 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 COMMD10Q9Y6G5 202 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 FAM169AQ9Y6X4 670 aa10.03□□□□□ -0.8
CPSF1-203ENST00000527916 NCOA6Q14686 2063 aaPredicted RBP10.03□□□□□ -0.8
CPSF1-203ENST00000527916 A0A1B0GX78 115 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 A0A1W2PPV9 198 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 E5RI56 91 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 MYO1CO00159 1063 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 EIF3FO00303 357 aaPredicted RBP10.02□□□□□ -0.81
CPSF1-203ENST00000527916 DSCR3O14972 297 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 KIF5CO60282 957 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 SLC19A2O60779 497 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 RASAL1O95294 804 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 CTSBP07858 339 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 UQCRHP07919 91 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 CD99P14209 185 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 HOXB4P17483 251 aaPredicted RBP10.02□□□□□ -0.81
CPSF1-203ENST00000527916 CLCN7P51798 805 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 ART1P52961 327 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 RELAQ04206 551 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 THOC5Q13769 683 aaKnown RBP10.02□□□□□ -0.81
CPSF1-203ENST00000527916 NKG7Q16617 165 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 LONRF1Q17RB8 773 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 KLHL38Q2WGJ6 581 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 TTLL9Q3SXZ7 439 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 CCSMST1Q4G0I0 132 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 ACSBG2Q5FVE4 666 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 CNSTQ6PJW8 725 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 TTLL10Q6ZVT0 673 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 PCGF5Q86SE9 256 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 PPIL6Q8IXY8 311 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 KBTBD2Q8IY47 623 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 OR2L3Q8NG85 312 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 OR11G2Q8NGC1 345 aa10.02□□□□□ -0.81
CPSF1-203ENST00000527916 SUN3Q8TAQ9 357 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms