RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 CSNK1G2P78368 415 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 ABATP80404 500 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 IRF8Q02556 426 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 ZFP36L1Q07352 338 aaKnown RBP13.17□□□□□ -0.3
CD44-224ENST00000526669 ASPHQ12797 758 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 DOC2AQ14183 400 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 SLBPQ14493 270 aaKnown RBP eCLIP13.17□□□□□ -0.3
CD44-224ENST00000526669 CLPPQ16740 277 aaPredicted RBP13.17□□□□□ -0.3
CD44-224ENST00000526669 ISXQ2M1V0 245 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 SLCO4C1Q6ZQN7 724 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 ARHGAP22Q7Z5H3 698 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 PAQR7Q86WK9 346 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 FAM129CQ86XR2 697 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 CHCHD4Q8N4Q1 142 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 ZNF740Q8NDX6 193 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
CD44-224ENST00000526669 TMEM74Q96NL1 305 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 PLCD4Q9BRC7 762 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 C1QTNF3Q9BXJ4 246 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 ZNF768Q9H5H4 540 aaKnown RBP13.17□□□□□ -0.3
CD44-224ENST00000526669 PELI2Q9HAT8 420 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 PRM3Q9NNZ6 103 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 GPRC5BQ9NZH0 403 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 PDP2Q9P2J9 529 aa13.17□□□□□ -0.3
CD44-224ENST00000526669 PMS2P1A4D2B8 440 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 OR2A25A4D2G3 310 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 EFCAB7A8K855 629 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 BIRC5O15392 142 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 HCRTR1O43613 425 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 CTSVO60911 334 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 LYPLA1O75608 230 aaPredicted RBP13.16□□□□□ -0.3
CD44-224ENST00000526669 OR4F21O95013 312 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 FKBP9O95302 570 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 C1GALT1C1LP0DN25 315 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 HGFP14210 728 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 JUPP14923 745 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 CD22P20273 847 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 CSTF2P33240 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
CD44-224ENST00000526669 CCR8P51685 355 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 SLC18A1P54219 525 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 REEP5Q00765 189 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 TRAF3Q13114 568 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 GPR19Q15760 415 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 ATG9BQ674R7 924 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 ZNF425Q6IV72 752 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 FOXR1Q6PIV2 292 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 FRMD7Q6ZUT3 714 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 SYVN1Q86TM6 617 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 DYDC1Q8WWB3 177 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 ADAMTS14Q8WXS8 1223 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 STRADBQ9C0K7 418 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 ACTR8Q9H981 624 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 SYNPO2LQ9H987 977 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 PDE7BQ9NP56 450 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 INTS9Q9NV88 658 aaKnown RBP13.16□□□□□ -0.3
CD44-224ENST00000526669 TMEM184CQ9NVA4 438 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 OCIAD1Q9NX40 245 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 BTRCQ9Y297 605 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 RNF11Q9Y3C5 154 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 DCHS1Q96JQ0 3298 aa13.16□□□□□ -0.3
CD44-224ENST00000526669 ITM2AO43736 263 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 LCMT2O60294 686 aaKnown RBP13.15□□□□□ -0.3
CD44-224ENST00000526669 CHRNGP07510 517 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 CTSBP07858 339 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 ANKRD34CP0C6C1 535 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 CDK4P11802 303 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 FOLR1P15328 257 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 NELFEP18615 380 aaKnown RBP13.15□□□□□ -0.3
CD44-224ENST00000526669 ARRB2P32121 409 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 CCKBRP32239 447 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 HSD11B2P80365 405 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 FOXC1Q12948 553 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 TARDBPQ13148 414 aaKnown RBP eCLIP13.15□□□□□ -0.3
CD44-224ENST00000526669 TRA2AQ13595 282 aaKnown RBP eCLIP13.15□□□□□ -0.3
CD44-224ENST00000526669 RCN2Q14257 317 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 PUM1Q14671 1186 aaKnown RBP eCLIP13.15□□□□□ -0.3
CD44-224ENST00000526669 RBBP5Q15291 538 aaKnown RBP13.15□□□□□ -0.3
CD44-224ENST00000526669 FRMPD2BQ6IN97 320 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 LETMD1Q6P1Q0 360 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 METTL2BQ6P1Q9 378 aaKnown RBP13.15□□□□□ -0.3
CD44-224ENST00000526669 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 MILR1Q7Z6M3 343 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 D2HGDHQ8N465 521 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 ABHD11Q8NFV4 315 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 OR4F6Q8NGB9 312 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 ZUFSPQ96AP4 578 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 SLC41A2Q96JW4 573 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 AIF1LQ9BQI0 150 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 CAPS2Q9BXY5 557 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 ZNF395Q9H8N7 513 aaPredicted RBP13.15□□□□□ -0.3
CD44-224ENST00000526669 TNFRSF12AQ9NP84 129 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 MID1IP1Q9NPA3 183 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 GEMIN8Q9NWZ8 242 aaKnown RBP13.15□□□□□ -0.3
CD44-224ENST00000526669 ANKMY1Q9P2S6 941 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 ZNF225Q9UK10 706 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 SNX7Q9UNH6 387 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 FIS1Q9Y3D6 152 aa13.15□□□□□ -0.3
CD44-224ENST00000526669 TMEM150CB9EJG8 249 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms