RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 FAM45AQ8TCE6 357 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 ASB11Q8WXH4 323 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 KLHL6Q8WZ60 621 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 ELMO2Q96JJ3 720 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 UBXN10Q96LJ8 280 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 C12orf66Q96MD2 445 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 GPR78Q96P69 363 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 TMUB1Q9BVT8 246 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 TBC1D10AQ9BXI6 508 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 PDE7BQ9NP56 450 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.5□□□□□ -0.73
NEDD8-204ENST00000526430 FETUBQ9UGM5 382 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 ADAMTS6Q9UKP5 1117 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 SLC39A10Q9ULF5 831 aa10.5□□□□□ -0.73
NEDD8-204ENST00000526430 PRRC2AP48634 2157 aaKnown RBP10.5□□□□□ -0.73
NEDD8-204ENST00000526430 ABCA4P78363 2273 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 A6NL46 340 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 KPNA5O15131 536 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 PHGDHO43175 533 aaKnown RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 VPS26AO75436 327 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 PSIP1O75475 530 aaKnown RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 NADKO95544 446 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 APOA4P06727 396 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 MPC1LP0DKB6 136 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 DRD2P14416 443 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 ZNF37AP17032 561 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 HTR1EP28566 365 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 SEPHS1P49903 392 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 POU4F1Q01851 419 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 PLOD1Q02809 727 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 GPR18Q14330 331 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 RASA2Q15283 850 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 VWA2Q5GFL6 755 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 PWWP2BQ6NUJ5 590 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 TIFABQ6ZNK6 161 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 NEK10Q6ZWH5 1172 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 PIWIL4Q7Z3Z4 852 aaKnown RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 CUZD1Q86UP6 607 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 FJX1Q86VR8 437 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 SPATA6LQ8N4H0 392 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 TMEM151AQ8N4L1 468 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 FLVCR1-AS1Q8TAF5 88 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 GABPB2Q8TAK5 448 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 DENND1AQ8TEH3 1009 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 UBLCP1Q8WVY7 318 aaPredicted RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 ZFPM2Q8WW38 1151 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 TM9SF4Q92544 642 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 C14orf79Q96F83 325 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 KIR3DX1Q9H7L2 352 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 POT1Q9NUX5 634 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 IMP3Q9NV31 184 aaKnown RBP10.49□□□□□ -0.73
NEDD8-204ENST00000526430 TAS2R13Q9NYV9 303 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 CTNNAL1Q9UBT7 734 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 SLC24A2Q9UI40 661 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
NEDD8-204ENST00000526430 EXOC1LA0A1B0GW35 172 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 A0A1W2PPM1 405 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 ARHGEF33A8MVX0 844 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 E5RI56 91 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 CPNE3O75131 537 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 IPO13O94829 963 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 C1orf105O95561 183 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 C2P06681 752 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 SNRPB2P08579 225 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 RAB40ALP0C0E4 278 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 SLC35G4P0C7Q5 338 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 CBSLP0DN79 551 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 CD99P14209 185 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 H2AFXP16104 143 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 NELFEP18615 380 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 SAT1P21673 171 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 CBSP35520 551 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 MSH2P43246 934 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 GLRBP48167 497 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 KRTAP10-9P60411 292 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 PRKG2Q13237 762 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TUBB3Q13509 450 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 USP10Q14694 798 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TDRPQ86YL5 185 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 LRRC56Q8IYG6 542 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 CENPLQ8N0S6 344 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 PLD6Q8N2A8 252 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 ZNF808Q8N4W9 903 aaPredicted RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 OR5K2Q8NHB8 316 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 EPS8L3Q8TE67 593 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 FAR1Q8WVX9 515 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 PTERQ96BW5 349 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TGM7Q96PF1 710 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 FERD3LQ96RJ6 166 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TMEM109Q9BVC6 243 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TSSK1BQ9BXA7 367 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 CCDC68Q9H2F9 335 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TFB2MQ9H5Q4 396 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 POPDC3Q9HBV1 291 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 SEMA5BQ9P283 1151 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TRMT6Q9UJA5 497 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TSR3Q9UJK0 312 aaKnown RBP10.48□□□□□ -0.73
NEDD8-204ENST00000526430 RARRES3Q9UL19 164 aa10.48□□□□□ -0.73
NEDD8-204ENST00000526430 TCFL5Q9UL49 500 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms