RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ATP5BP06576 529 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 ITGA2BP08514 1039 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CTAGE8P0CG41 777 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 HSD3B1P14060 373 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 HLA-FP30511 346 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CD70P32970 193 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 NNMTP40261 264 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 OPRD1P41143 372 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 EIF2DP41214 584 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 GARSP41250 739 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 TNFRSF4P43489 277 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 SOX2P48431 317 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ECT2LQ008S8 904 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 TLE3Q04726 772 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 SULT2A1Q06520 285 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ZNF33AQ06730 810 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 GALNT2Q10471 571 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 BYSLQ13895 437 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 E2F5Q15329 346 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 RBMS2Q15434 407 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 SIX1Q15475 284 aaPredicted RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 ACCSLQ4AC99 568 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 DNAJC21Q5F1R6 531 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 MARC1Q5VT66 337 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 DHRS13Q6UX07 377 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 FAM57BQ71RH2 274 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 B4GALNT4Q76KP1 1039 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 GSTA5Q7RTV2 222 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 PID1Q7Z2X4 250 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CTAGE6Q86UF2 777 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ANKRD13BQ86YJ7 626 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ARHGAP12Q8IWW6 846 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CTAGE4Q8IX94 777 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CCDC13Q8IYE1 715 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CCDC105Q8IYK2 499 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 UBALD2Q8IYN6 164 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 APCDD1Q8J025 514 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ATPAF2Q8N5M1 289 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 NPWQ8N729 165 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CEP112Q8N8E3 955 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 PRELID2Q8N945 189 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ADPRHL1Q8NDY3 354 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 MNS1Q8NEH6 495 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 SPATA4Q8NEY3 305 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 OR52K2Q8NGK3 314 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CCDC26Q8TAB7 109 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ACTL9Q8TC94 416 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 WFDC5Q8TCV5 224 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 WFIKKN2Q8TEU8 576 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 UCMAQ8WVF2 138 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 TFB1MQ8WVM0 346 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 HDAC11Q96DB2 347 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ALG14Q96F25 216 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 HMCESQ96FZ2 354 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 LMLNQ96KR4 655 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 RUNDC3BQ96NL0 473 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 GPR78Q96P69 363 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 LGMNQ99538 433 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 P2RY13Q9BPV8 354 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 MYLK2Q9H1R3 596 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 HEBP1Q9NRV9 189 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ABCB8Q9NUT2 735 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ELOVL2Q9NXB9 296 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 SMARCAL1Q9NZC9 954 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 IFT80Q9P2H3 777 aaPredicted RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 PDP2Q9P2J9 529 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 WNT16Q9UBV4 365 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 IPO11Q9UI26 975 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 GGA2Q9UJY4 613 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 DNPEPQ9ULA0 475 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 DUSP12Q9UNI6 340 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 SLC12A4Q9UP95 1085 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 NEU3Q9UQ49 428 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 ZNF148Q9UQR1 794 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 R3HDM2Q9Y2K5 976 aaKnown RBP4.44□□□□□ -1.7
USP48-211ENST00000526044 OR51B4Q9Y5P0 310 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 PIAS3Q9Y6X2 628 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 LAMA3Q16787 3333 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 CHD5Q8TDI0 1954 aa4.44□□□□□ -1.7
USP48-211ENST00000526044 NYNRINQ9P2P1 1898 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 CXorf51AA0A1B0GTR3 108 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 BCLAF3A2AJT9 711 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 ZSCAN5CA6NGD5 496 aaPredicted RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 SPECC1L-ADORA2AF8WAN1 911 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SGK1O00141 431 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SYT5O00445 386 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 KCNN4O15554 427 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SNAP91O60641 907 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 PRAMEF11O60813 436 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CNOT3O75175 753 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 ZMPSTE24O75844 475 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 NEBLO76041 1014 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 KAT7O95251 611 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SRPRAP08240 638 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 RFPL3SP0C7P2 107 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CCNB1P14635 433 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CHRNA3P32297 505 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 GRK5P34947 590 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 ACTN2P35609 894 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SERPINF1P36955 418 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms