RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 FAM169AQ9Y6X4 670 aa6.25□□□□□ -1.41
CD44-221ENST00000526000 F8P00451 2351 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 IGHV1-45A0A0A0MS14 117 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 A0A1W2PPV9 198 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 HEATR9A2RTY3 570 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 FITM1A5D6W6 292 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 TARM1B6A8C7 271 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 F8W8V4 182 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PRMT5O14744 637 aaPredicted RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 CD3EAPO15446 510 aaKnown RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 FOXS1O43638 330 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 MAN1A2O60476 641 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PRAMEF2O60811 474 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 NIPSNAP2O75323 286 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 SNRNP200O75643 2136 aaKnown RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 SLCO2B1O94956 709 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 SYF2O95926 243 aaKnown RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 CRYABP02511 175 aaKnown RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 RPN2P04844 631 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ANXA5P08758 320 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ADRA1DP25100 572 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 NMBRP28336 390 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CMPK1P30085 196 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CASQ1P31415 396 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 RPA3P35244 121 aaPredicted RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 DEKP35659 375 aaKnown RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 SOX11P35716 441 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CA7P43166 264 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 HSF1Q00613 529 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 RBPJQ06330 500 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CDH17Q12864 832 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PCOLCEQ15113 449 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 TMED2Q15363 201 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PRTGQ2VWP7 1150 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 BTBD16Q32M84 506 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ZNF766Q5HY98 468 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 SPINK14Q6IE38 97 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PRMT9Q6P2P2 845 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 DRICH1Q6PGQ1 229 aaPredicted RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 UNC5DQ6UXZ4 953 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 LANCL3Q6ZV70 420 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 OTOAQ7RTW8 1153 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 LINC00523Q86TU6 105 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CEP97Q8IW35 865 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 KLHDC8BQ8IXV7 354 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PIP4P2Q8N4L2 257 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ZNF808Q8N4W9 903 aaPredicted RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 ACTRT1Q8TDG2 376 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ADAMTS18Q8TE60 1221 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 NACC2Q96BF6 587 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ALKBH8Q96BT7 664 aaKnown RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 ZNF285Q96NJ3 590 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 RUNDC3BQ96NL0 473 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PPP1R2P1Q96PQ5 205 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 OSBPL9Q96SU4 736 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ZFYVE21Q9BQ24 234 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 TSSK1BQ9BXA7 367 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 KCNK13Q9HB14 408 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 MRPS30Q9NP92 439 aaKnown RBP6.24□□□□□ -1.41
CD44-221ENST00000526000 CHST11Q9NPF2 352 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 RAB6BQ9NRW1 208 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CATSPERZQ9NTU4 200 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 TAC3Q9UHF0 121 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 PCYOX1Q9UHG3 505 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CDC14AQ9UNH5 594 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 ZNF148Q9UQR1 794 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 CRYL1Q9Y2S2 319 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 NEU2Q9Y3R4 380 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 TCAF1Q9Y4C2 921 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 SAR1BQ9Y6B6 198 aa6.24□□□□□ -1.41
CD44-221ENST00000526000 C2CD3Q4AC94 2353 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 GOLGA6L10A0A0M3HER8 536 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 OR2A25A4D2G3 310 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 OR5H15A6NDH6 313 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 H7BY64 318 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 PGRMC1O00264 195 aaKnown RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 P2RX6O15547 441 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 TTI1O43156 1089 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 ZNF500O60304 480 aaPredicted RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 SLC19A2O60779 497 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 APRTP07741 180 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 CHRM3P20309 590 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 PPARGP37231 505 aaPredicted RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 CD96P40200 585 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 PAFAH1B1P43034 410 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 CASP6P55212 293 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 ALDH6A1Q02252 535 aaKnown RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 OC90Q02509 493 aaPredicted RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 ACTN3Q08043 901 aaPredicted RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 KLF1Q13351 362 aaPredicted RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 MAPKAPK3Q16644 382 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 KLHL38Q2WGJ6 581 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 P3H1Q32P28 736 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 MINDY4Q4G0A6 757 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 ACSBG2Q5FVE4 666 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 CTSL3PQ5NE16 218 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 XKRXQ6PP77 449 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 BNC2Q6ZN30 1099 aaPredicted RBP6.23□□□□□ -1.41
CD44-221ENST00000526000 PRSS41Q7RTY9 318 aa6.23□□□□□ -1.41
CD44-221ENST00000526000 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms