RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.73□□□□□ -1.81
CD44-215ENST00000525241 OCC1Q8TAD7 63 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 NSMAFQ92636 917 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 MOCOSQ96EN8 888 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 SIPA1Q96FS4 1042 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 KLHL5Q96PQ7 755 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 SPAG5Q96R06 1193 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 NDNQ99608 321 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 MGME1Q9BQP7 344 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 SYT11Q9BT88 431 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 GTPBP2Q9BX10 602 aaKnown RBP3.73□□□□□ -1.81
CD44-215ENST00000525241 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.73□□□□□ -1.81
CD44-215ENST00000525241 ANAPC5Q9UJX4 755 aa3.73□□□□□ -1.81
CD44-215ENST00000525241 IGLV7-46A0A075B6I9 117 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 A0A087WUV0 522 aaPredicted RBP3.72□□□□□ -1.81
CD44-215ENST00000525241 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 KRTAP16-1A8MUX0 517 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 H0YAE9 185 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 MAGEC1O60732 1142 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 NXPH2O95156 264 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 MYL6BP14649 208 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 CRKLP46109 303 aaKnown RBP3.72□□□□□ -1.81
CD44-215ENST00000525241 GUCY2DQ02846 1103 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 CACNG1Q06432 222 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 TFCP2Q12800 502 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 TRIM29Q14134 588 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 TAZQ16635 292 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 UGCGQ16739 394 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 LBHQ53QV2 105 aaPredicted RBP3.72□□□□□ -1.81
CD44-215ENST00000525241 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 CTR9Q6PD62 1173 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 TRAT1Q6PIZ9 186 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 NRARPQ7Z6K4 114 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 RCOR2Q8IZ40 523 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 FAM89BQ8N5H3 189 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 MAPK1IP1LQ8NDC0 245 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 MAPK15Q8TD08 544 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 METTL21AQ8WXB1 218 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 SEPT1Q8WYJ6 367 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 P2RX5Q93086 422 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 TSACCQ96A04 125 aaPredicted RBP3.72□□□□□ -1.81
CD44-215ENST00000525241 CENPTQ96BT3 561 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 PGM2Q96G03 612 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 RAB3IPQ96QF0 476 aaPredicted RBP3.72□□□□□ -1.81
CD44-215ENST00000525241 CDCA3Q99618 268 aaPredicted RBP3.72□□□□□ -1.81
CD44-215ENST00000525241 FGFBP2Q9BYJ0 223 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 SDCBP2Q9H190 292 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 PFDN4Q9NQP4 134 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 PANK4Q9NVE7 773 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 SNX7Q9UNH6 387 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 RNF215Q9Y6U7 377 aa3.72□□□□□ -1.81
CD44-215ENST00000525241 IGSF1Q8N6C5 1336 aa3.71□□□□□ -1.81
CD44-215ENST00000525241 A0A1B0GU03 582 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 A0A1W2PPW3 197 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 C17orf105B2RV13 164 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 H7C423 109 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 PRAF2O60831 178 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 LUC7L3O95232 432 aaKnown RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 ZSCAN5DPP0CG00 497 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 F3P13726 295 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 CD59P13987 128 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 PDGFRAP16234 1089 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 DPEP1P16444 411 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 RPL35AP18077 110 aaKnown RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 ADRA2CP18825 462 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 MMP12P39900 470 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 SOX3P41225 446 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 NAGLUP54802 743 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 MFAP3P55082 362 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 XGP55808 180 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 E2F5Q15329 346 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 PTPN14Q15678 1187 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 WLSQ5T9L3 541 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 ZNF613Q6PF04 617 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 CPEB2Q7Z5Q1 589 aaKnown RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 DNAJB7Q7Z6W7 309 aaPredicted RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 APCDD1Q8J025 514 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 LRTM2Q8N967 370 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 OR6S1Q8NH40 331 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 C9orf43Q8TAL5 461 aaPredicted RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 RAD54LQ92698 747 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 SLCO2A1Q92959 643 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 PYCR2Q96C36 320 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 GDAP1L1Q96MZ0 367 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 FAM218AQ96MZ4 157 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 ZNF300Q96RE9 604 aaPredicted RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 PI4K2AQ9BTU6 479 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 MCRIP2Q9BUT9 160 aaKnown RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 DGCR6LQ9BY27 220 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 SNX25Q9H3E2 840 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 EGLN3Q9H6Z9 239 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 RAVER2Q9HCJ3 691 aaKnown RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 ZCCHC17Q9NP64 241 aaKnown RBP3.71□□□□□ -1.82
CD44-215ENST00000525241 PRDM4Q9UKN5 801 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 PRSS21Q9Y6M0 314 aa3.71□□□□□ -1.82
CD44-215ENST00000525241 IL16Q14005 1332 aa3.7□□□□□ -1.82
CD44-215ENST00000525241 TRBV4-1A0A0J9YWV2 114 aa3.7□□□□□ -1.82
CD44-215ENST00000525241 MEX3AA1L020 520 aaKnown RBP3.7□□□□□ -1.82
CD44-215ENST00000525241 MTMR11A4FU01 709 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms