RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CLN5O75503 358 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 PIGNO95427 931 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 EFEMP2O95967 443 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 GAS8O95995 478 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 WNT11O96014 354 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ITGB3P05106 788 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CEACAM5P06731 702 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 RPSAP08865 295 aaKnown RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 ALDOCP09972 364 aaKnown RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 RRASP10301 218 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ZNF44P15621 663 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 TAL1P17542 331 aaPredicted RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 HNF1AP20823 631 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 TGM2P21980 687 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 GCSHP23434 173 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 DDX6P26196 483 aaKnown RBP eCLIP4.3□□□□□ -1.72
CD44-213ENST00000525209 EPHB2P29323 1055 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 PPP2R1AP30153 589 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SHMT1P34896 483 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 EVI2BP34910 448 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 OR1D2P34982 312 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SPAM1P38567 509 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 PRCPP42785 496 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 NSFP46459 744 aaKnown RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 ATP12AP54707 1039 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ADPRHP54922 357 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SELPLGQ14242 412 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 GK2Q14410 553 aaPredicted RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 RTP5Q14D33 572 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ZNF124Q15973 351 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CARTPTQ16568 116 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 C6orf10Q5SRN2 563 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 TCERG1LQ5VWI1 586 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 FAM173BQ6P4H8 233 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ANKRD16Q6P6B7 361 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 LRRC8BQ6P9F7 803 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 COLCA1Q6ZS62 124 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ANO5Q75V66 913 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 TMPRSS9Q7Z410 1059 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 VTCN1Q7Z7D3 282 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 KIAA1328Q86T90 577 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 LUZP2Q86TE4 346 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 FAM131BQ86XD5 332 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 FOXRED2Q8IWF2 684 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ADGRF3Q8IZF5 1079 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CMTM4Q8IZR5 234 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SLC25A41Q8N5S1 370 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 KIAA0895Q8NCT3 520 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ADPRHL1Q8NDY3 354 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CDC26Q8NHZ8 85 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CHPT1Q8WUD6 406 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CELF1Q92879 486 aaKnown RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 CIDECQ96AQ7 238 aaPredicted RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 ORAI1Q96D31 301 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SPDL1Q96EA4 605 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ELMO2Q96JJ3 720 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ZNF48Q96MX3 618 aaPredicted RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 INPP4AQ96PE3 977 aaPredicted RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 RASL10BQ96S79 203 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 MYADMQ96S97 322 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SEPHS2Q99611 448 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 FAM110AQ9BQ89 295 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ACBD6Q9BR61 282 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 TRMOQ9BU70 441 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 RAD21L1Q9H4I0 556 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CATSPERBQ9H7T0 1116 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SFXN1Q9H9B4 322 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CALHM2Q9HA72 323 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SLC28A3Q9HAS3 691 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 BPIFA1Q9NP55 256 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 TNFRSF12AQ9NP84 129 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 UXTQ9UBK9 157 aaPredicted RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 RNF14Q9UBS8 474 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SERTAD3Q9UJW9 196 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ERVK-19Q9WJR5 959 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SLC22A14Q9Y267 594 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 IFT52Q9Y366 437 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 SH3GLB1Q9Y371 365 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 CLIC4Q9Y696 253 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ZHX2Q9Y6X8 837 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ABCA9Q8IUA7 1624 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 MED1Q15648 1581 aaPredicted RBP4.3□□□□□ -1.72
CD44-213ENST00000525209 ARHGAP5Q13017 1502 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 ATP10BO94823 1461 aa4.3□□□□□ -1.72
CD44-213ENST00000525209 HEG1Q9ULI3 1381 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 CAMSAP1Q5T5Y3 1602 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 HECW1Q76N89 1606 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 ABCA8O94911 1581 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 A0A087X0K7 114 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 FEZF1A0PJY2 475 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 TMEM191CA6NGB0 347 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 PCP4L1A6NKN8 68 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 E7ENX8 843 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 DFNA5O60443 496 aa4.29□□□□□ -1.72
CD44-213ENST00000525209 SDC3O75056 442 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms