RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ANKRD20A8PQ5CZ79 823 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 CCDC158Q5M9N0 1113 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 FFAR4Q5NUL3 377 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 ANKRD20A2Q5SQ80 823 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.52□□□□□ -1.85
SKP1-212ENST00000523966 ANKRD20A1Q5TYW2 823 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 ANKRD20A3Q5VUR7 823 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 TXNRD3NBQ6F5E7 133 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 TTC27Q6P3X3 843 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 MARK2Q7KZI7 788 aaKnown RBP3.52□□□□□ -1.85
SKP1-212ENST00000523966 FAM9BQ8IZU0 186 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 KIRREL3Q8IZU9 778 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 LSMEM2Q8N112 164 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 RAB42Q8N4Z0 105 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 OR4C3Q8NH37 302 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 OLIG1Q8TAK6 271 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 DYRK2Q92630 601 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 BTBD9Q96Q07 612 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 FSD1Q9BTV5 496 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 DNAI2Q9GZS0 605 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 LSG1Q9H089 658 aaKnown RBP3.52□□□□□ -1.85
SKP1-212ENST00000523966 P2RY12Q9H244 342 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 ABCB8Q9NUT2 735 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 TMEM161AQ9NX61 479 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 SEPT10Q9P0V9 454 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 DNAJB9Q9UBS3 223 aa3.52□□□□□ -1.85
SKP1-212ENST00000523966 LEF1Q9UJU2 399 aaPredicted RBP3.52□□□□□ -1.85
SKP1-212ENST00000523966 IGHV4-4A0A075B6R2 117 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 A0A0U1RQK1 487 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 ZNF320A2RRD8 509 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 F8VVB4 439 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 F8VWA3 439 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 SLCO1B7G3V0H7 640 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 SLC30A4O14863 429 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 PRAF2O60831 178 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 DDHD2O94830 711 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 IGKV3-20P01619 116 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 SP1P08047 785 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 SUPT20HL2P0C7V6 817 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 LBPP18428 481 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 CD27P26842 260 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 PSMB4P28070 264 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 SSTR1P30872 391 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 COPB2P35606 906 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 DNA2P51530 1060 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 CLDN15P56746 228 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 PTENP60484 403 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 HNRNPA0Q13151 305 aaKnown RBP3.51□□□□□ -1.85
SKP1-212ENST00000523966 E2F5Q15329 346 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 CCDC6Q16204 474 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 ZRANB3Q5FWF4 1079 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 XKR3Q5GH77 459 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 UGT3A1Q6NUS8 523 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 CYB5D1Q6P9G0 228 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 ZNF790Q6PG37 636 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 C15orf39Q6ZRI6 1047 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 OTOAQ7RTW8 1153 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 RCOR2Q8IZ40 523 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 NUP93Q8N1F7 819 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 PRSS35Q8N3Z0 413 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 DBF4BQ8NFT6 615 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 OR4C15Q8NGM1 316 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 NCOA7Q8NI08 942 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 MRGPRDQ8TDS7 321 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 P2RX5Q93086 422 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 SENP5Q96HI0 755 aaPredicted RBP3.51□□□□□ -1.85
SKP1-212ENST00000523966 C4orf45Q96LM5 186 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 GDAP1L1Q96MZ0 367 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 CDCA3Q99618 268 aaPredicted RBP3.51□□□□□ -1.85
SKP1-212ENST00000523966 NYXQ9GZU5 481 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 ALDH8A1Q9H2A2 487 aaPredicted RBP3.51□□□□□ -1.85
SKP1-212ENST00000523966 MMADHCQ9H3L0 296 aaPredicted RBP3.51□□□□□ -1.85
SKP1-212ENST00000523966 RPF1Q9H9Y2 349 aaKnown RBP3.51□□□□□ -1.85
SKP1-212ENST00000523966 LMAN1LQ9HAT1 526 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 FANCD2Q9BXW9 1451 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 TOP2BQ02880 1626 aa3.51□□□□□ -1.85
SKP1-212ENST00000523966 SDR42E2A6NKP2 422 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 PRR23D1E9PI22 279 aaPredicted RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 SLC33A1O00400 549 aaPredicted RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 ZNF263O14978 683 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 LINC01565O15544 149 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 SELENOFO60613 162 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 AP2A2O94973 939 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 FAM157CP0CG43 387 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 PRR23D2P0DMB1 279 aaPredicted RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 SLC2A2P11168 524 aaPredicted RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 GP1BBP13224 206 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 CCND3P30281 292 aaPredicted RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 GMPSP49915 693 aaPredicted RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 SNRPD1P62314 119 aaKnown RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 CETN1Q12798 172 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 HNRNPDQ14103 355 aaKnown RBP3.5□□□□□ -1.85
SKP1-212ENST00000523966 TRIM29Q14134 588 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 NFE2L1Q14494 772 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 SLMAPQ14BN4 828 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 SGSM1Q2NKQ1 1148 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 XKR6Q5GH73 641 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 SLC25A53Q5H9E4 307 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 FAM46CQ5VWP2 391 aa3.5□□□□□ -1.85
SKP1-212ENST00000523966 TMEM207Q6UWW9 146 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms