RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SEPHS2Q99611 448 aa5.35□□□□□ -1.55
CPNE3-206ENST00000523469 TEX13AQ9BXU3 409 aaPredicted RBP5.35□□□□□ -1.55
CPNE3-206ENST00000523469 NYXQ9GZU5 481 aa5.35□□□□□ -1.55
CPNE3-206ENST00000523469 SIX2Q9NPC8 291 aa5.35□□□□□ -1.55
CPNE3-206ENST00000523469 PIH1D3Q9NQM4 214 aaKnown RBP5.35□□□□□ -1.55
CPNE3-206ENST00000523469 FLRT3Q9NZU0 649 aa5.35□□□□□ -1.55
CPNE3-206ENST00000523469 ZDHHC2Q9UIJ5 367 aa5.35□□□□□ -1.55
CPNE3-206ENST00000523469 KCNJ14Q9UNX9 436 aa5.35□□□□□ -1.55
CPNE3-206ENST00000523469 HEG1Q9ULI3 1381 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 LAMA2P24043 3122 aaKnown RBP5.34□□□□□ -1.55
CPNE3-206ENST00000523469 KIF7Q2M1P5 1343 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 IGLV9-49A0A0B4J1Y8 123 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 DNM1LO00429 736 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 MEIS2O14770 477 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 P4HA2O15460 535 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 EDIL3O43854 480 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 FRMD6-AS1P0C7T7 363 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 FOSL2P15408 326 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 EFNA1P20827 205 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-206ENST00000523469 CEACAM8P31997 349 aaPredicted RBP5.34□□□□□ -1.55
CPNE3-206ENST00000523469 CAPZA2P47755 286 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 TAF13Q15543 124 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 TMEM266Q2M3C6 531 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 ERMARDQ5T6L9 678 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 LSMEM1Q8N8F7 131 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 CCDC89Q8N998 374 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 ZNF383Q8NA42 475 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 TEKT4Q8WW24 435 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 GPR88Q9GZN0 384 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 NOL11Q9H8H0 719 aaKnown RBP5.34□□□□□ -1.55
CPNE3-206ENST00000523469 DBNDD1Q9H9R9 158 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 A4GALTQ9NPC4 353 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 SERINC1Q9NRX5 453 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 ATP6V0A2Q9Y487 856 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 MGAMO43451 1857 aa5.34□□□□□ -1.55
CPNE3-206ENST00000523469 SIPA1L3O60292 1781 aaPredicted RBP5.34□□□□□ -1.56
CPNE3-206ENST00000523469 ANKRD36CQ5JPF3 1778 aa5.34□□□□□ -1.56
CPNE3-206ENST00000523469 OTOFQ9HC10 1997 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 TRBC2A0A5B9 178 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 ATP6V0E1O15342 81 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 CLPTM1O96005 669 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 PAK4O96013 591 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-206ENST00000523469 CCL5P13501 91 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 KCNJ10P78508 379 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 PPIGQ13427 754 aaKnown RBP eCLIP5.33□□□□□ -1.56
CPNE3-206ENST00000523469 LETM2Q2VYF4 491 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 TMEM30BQ3MIR4 351 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 C6orf163Q5TEZ5 329 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 FAM53AQ6NSI3 398 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-206ENST00000523469 ADAM5Q6NVV9 412 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 C15orf39Q6ZRI6 1047 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 SH2D5Q6ZV89 423 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 KCTD6Q8NC69 237 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 OLIG1Q8TAK6 271 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 TMEM190Q8WZ59 177 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 DHX58Q96C10 678 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 CDX2Q99626 313 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-206ENST00000523469 FSD1Q9BTV5 496 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 RBM4Q9BWF3 364 aaKnown RBP5.33□□□□□ -1.56
CPNE3-206ENST00000523469 LAT2Q9GZY6 243 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 PRMT7Q9NVM4 692 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-206ENST00000523469 C2orf42Q9NWW7 574 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 DDX43Q9NXZ2 648 aaKnown RBP5.33□□□□□ -1.56
CPNE3-206ENST00000523469 MDFICQ9P1T7 246 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 LRWD1Q9UFC0 647 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 SLC24A2Q9UI40 661 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 LRRC37AA6NMS7 1700 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 EYSQ5T1H1 3165 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 DUOX1Q9NRD9 1551 aa5.33□□□□□ -1.56
CPNE3-206ENST00000523469 PRUNE2Q8WUY3 3088 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 DDX60LQ5H9U9 1706 aaKnown RBP5.32□□□□□ -1.56
CPNE3-206ENST00000523469 IGHV4-61A0A0C4DH41 118 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 LOC101059948A0A1B0GTJ6 334 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 ECE2O60344 883 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 PSMD10O75832 226 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 IGHV4-59P01825 116 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 EDN1P05305 212 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 CD48P09326 243 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 CA4P22748 312 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 NR0B1P51843 470 aaKnown RBP5.32□□□□□ -1.56
CPNE3-206ENST00000523469 NUCB1Q02818 461 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 AIMP1Q12904 312 aaKnown RBP5.32□□□□□ -1.56
CPNE3-206ENST00000523469 ELFN2Q5R3F8 820 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 ARHGAP11AQ6P4F7 1023 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 NUDT13Q86X67 352 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 TTC30BQ8N4P2 665 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 MAPKAPK5-AS1Q8N8E1 139 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 NPEPL1Q8NDH3 523 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 RAET1EQ8TD07 263 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 U2AF1L4Q8WU68 220 aaKnown RBP5.32□□□□□ -1.56
CPNE3-206ENST00000523469 SSMEM1Q8WWF3 244 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 LITAFQ99732 161 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 CENPOQ9BU64 300 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 SDR39U1Q9NRG7 319 aaPredicted RBP5.32□□□□□ -1.56
CPNE3-206ENST00000523469 SPHK1Q9NYA1 384 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 PADI2Q9Y2J8 665 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 ECM29Q5VYK3 1845 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 KIF26BQ2KJY2 2108 aa5.32□□□□□ -1.56
CPNE3-206ENST00000523469 ABCC4O15439 1325 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms