RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 STT3BQ8TCJ2 826 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 COL26A1Q96A83 441 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 PNPLA2Q96AD5 504 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 TRIM51Q9BSJ1 452 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 ATP13A2Q9NQ11 1180 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 TAS2R13Q9NYV9 303 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 LUZP4Q9P127 313 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 TRMT6Q9UJA5 497 aaKnown RBP11.79□□□□□ -0.52
VEGFA-223ENST00000523125 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 NXT1Q9UKK6 140 aaKnown RBP11.79□□□□□ -0.52
VEGFA-223ENST00000523125 PYCARDQ9ULZ3 195 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 G3BP2Q9UN86 482 aaKnown RBP11.79□□□□□ -0.52
VEGFA-223ENST00000523125 PDE10AQ9Y233 779 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 TEX264Q9Y6I9 313 aa11.79□□□□□ -0.52
VEGFA-223ENST00000523125 H7BY64 318 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 P2RX6O15547 441 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 TTI1O43156 1089 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 FOXS1O43638 330 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 CCNDBP1O95273 360 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 TSPAN12O95859 305 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 ZGLP1P0C6A0 271 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 UQCRFS1P47985 274 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 Q0VFX4 171 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 AIMP2Q13155 320 aaKnown RBP11.78□□□□□ -0.52
VEGFA-223ENST00000523125 INPP5JQ15735 1006 aaPredicted RBP11.78□□□□□ -0.52
VEGFA-223ENST00000523125 PHKG1Q16816 387 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 VWA2Q5GFL6 755 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 PRAMEF13Q5VWM6 474 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 STEAP4Q687X5 459 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 LRRC8EQ6NSJ5 796 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 UGT3A1Q6NUS8 523 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 MBOAT1Q6ZNC8 495 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 PLD3Q8IV08 490 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 PDIK1LQ8N165 341 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 CSNK1A1LQ8N752 337 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 AMER3Q8N944 861 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 GALNT11Q8NCW6 608 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 OR11G2Q8NGC1 345 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 MCOLN3Q8TDD5 553 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 CABS1Q96KC9 395 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 PRAP1Q96NZ9 151 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 SEMA3GQ9NS98 782 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 ZNF282Q9UDV7 671 aaPredicted RBP11.78□□□□□ -0.52
VEGFA-223ENST00000523125 CHMP2BQ9UQN3 213 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 SH2B3Q9UQQ2 575 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
VEGFA-223ENST00000523125 USP9YO00507 2555 aaPredicted RBP11.77□□□□□ -0.52
VEGFA-223ENST00000523125 HIVEP3Q5T1R4 2406 aa11.77□□□□□ -0.52
VEGFA-223ENST00000523125 FFAR3O14843 346 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 GPR42O15529 346 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 SEC31AO94979 1220 aaKnown RBP11.77□□□□□ -0.53
VEGFA-223ENST00000523125 C8GP07360 202 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 FBLP22087 321 aaKnown RBP11.77□□□□□ -0.53
VEGFA-223ENST00000523125 SLC26A3P40879 764 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 ITGA8P53708 1063 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 TBPL1P62380 186 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 OCA2Q04671 838 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 DSG2Q14126 1118 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 CRB2Q5IJ48 1285 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 THEMIS2Q5TEJ8 643 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 GARNL3Q5VVW2 1013 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 ATG9BQ674R7 924 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 AGTRAPQ6RW13 159 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 ATCAYQ86WG3 371 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 PRSS58Q8IYP2 241 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 GABPB2Q8TAK5 448 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-223ENST00000523125 MIEF2Q96C03 454 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 LRRC39Q96DD0 335 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 MVB12AQ96EY5 273 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 LINGO1Q96FE5 620 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 CCDC138Q96M89 665 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 NAPGQ99747 312 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-223ENST00000523125 CRB3Q9BUF7 120 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 PARVBQ9HBI1 364 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 CCDC177Q9NQR7 707 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-223ENST00000523125 TMEM184CQ9NVA4 438 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 UTP6Q9NYH9 597 aaKnown RBP11.77□□□□□ -0.53
VEGFA-223ENST00000523125 CDC14AQ9UNH5 594 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 B3GNT3Q9Y2A9 372 aa11.77□□□□□ -0.53
VEGFA-223ENST00000523125 MRPS2Q9Y399 296 aaKnown RBP11.77□□□□□ -0.53
VEGFA-223ENST00000523125 KCNE1BA0A087WTH5 132 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 A0A0A6YYC8 382 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-223ENST00000523125 CCDC188H7C350 402 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 I3L1I5 382 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-223ENST00000523125 SLC16A5O15375 505 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 IPO13O94829 963 aaKnown RBP11.76□□□□□ -0.53
VEGFA-223ENST00000523125 ALPPP05187 535 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 FDXRP22570 491 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 GNLYP22749 145 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 ITGA3P26006 1051 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 RGS4P49798 205 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 EFNA3P52797 238 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 CSNK1G2P78368 415 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 CBLBQ13191 982 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 SP140Q13342 867 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 FAM53BQ14153 422 aa11.76□□□□□ -0.53
VEGFA-223ENST00000523125 FRG1Q14331 258 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms