RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	TRPV4	Q9HBA0	871 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	NFS1	Q9Y697	457 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	OR10H3	O60404	316 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	ATP1B2	P14415	290 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	OTX2	P32243	289 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	COL9A3	Q14050	684 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SPIN4	Q56A73	249 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	MS4A13	Q5J8X5	152 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	ZDHHC24	Q6UX98	284 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	UNC5A	Q6ZN44	842 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	TRAM1L1	Q8N609	369 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	PLEKHO2	Q8TD55	490 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	HAS1	Q92839	578 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	RBP7	Q96R05	134 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	EIF2B3	Q9NR50	452 aa	Known RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SACM1L	Q9NTJ5	587 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC39A1	Q9NY26	324 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	UBE2QL1	A1L167	161 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653		H3BSA7	217 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	TEX46	H3BTG2	121 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SNAI1	O95863	264 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	RPS15A	P62244	130 aa	Known RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	PPP3CA	Q08209	521 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	MALL	Q13021	153 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC8B1	Q6J4K2	584 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	LINGO4	Q6UY18	593 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	TOR1AIP2	Q8NFQ8	470 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	RFK	Q969G6	155 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	FARSB	Q9NSD9	589 aa	Known RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	PNPO	Q9NVS9	261 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SMPD3	Q9NY59	655 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC6A14	Q9UN76	642 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	IFT52	Q9Y366	437 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	PEAK1	Q9H792	1746 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	NPIPA2	E9PIF3	369 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	LOC110117498-PIK3R3	F6TDL0	507 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	NPIPA3	F8WFD2	350 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653		H3BQ06	376 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	PROM1	O43490	865 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	MPZL2	O60487	215 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	CALCA	P01258	141 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	RNH1	P13489	461 aa	Known RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	ITPKA	P23677	461 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	ADSL	P30566	484 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	WDR4	P57081	412 aa	Known RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	TGFBR3	Q03167	851 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	SYT16	Q17RD7	645 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	ZNF423	Q2M1K9	1284 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	GPALPP1	Q8IXQ4	340 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	DEFB119	Q8N690	84 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	PRR11	Q96HE9	360 aa	Predicted RBP	10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	ENY2	Q9NPA8	101 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	PPP4R1L	Q9P1A2	415 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	FETUB	Q9UGM5	382 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	TMEM59L	Q9UK28	342 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	TCAF1	Q9Y4C2	921 aa		10.07	□□□□□ -0.8
TCF7-223	ENST00000522653	DLG5	Q8TDM6	1919 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653		A0A1W2PQU0	124 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	MYBPHL	A2RUH7	354 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	ADAMTS3	O15072	1205 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	DHX15	O43143	795 aa	Known RBP	10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	TGM5	O43548	720 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	MMP20	O60882	483 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	BANF1	O75531	89 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	RGS20	O76081	388 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	AK1	P00568	194 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	CLCN2	P51788	898 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	NAGLU	P54802	743 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	KCNK18	Q7Z418	384 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	SLC22A15	Q8IZD6	547 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	TRPV1	Q8NER1	839 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	PPP1R35	Q8TAP8	253 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	TFG	Q92734	400 aa	Predicted RBP	10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	EXOSC8	Q96B26	276 aa	Known RBP	10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	KIFC1	Q9BW19	673 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	B3GNT5	Q9BYG0	378 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	CD84	Q9UIB8	345 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	ZNF490	Q9ULM2	529 aa	Predicted RBP	10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	GMPPB	Q9Y5P6	360 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	IGKV6D-41	A0A0C4DH26	115 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653		A8MVJ9	347 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	ZNF20	P17024	532 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	ATF4	P18848	351 aa	Predicted RBP	10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	C5orf22	Q49AR2	442 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	TSTD2	Q5T7W7	516 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	CNTD1	Q8N815	330 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	TMEM178A	Q8NBL3	297 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	GLIS3	Q8NEA6	775 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	PPP1R13L	Q8WUF5	828 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	NINJ1	Q92982	152 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	ACTRT3	Q9BYD9	372 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	TMEM9B	Q9NQ34	198 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	HPF1	Q9NWY4	346 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	COMMD9	Q9P000	198 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	XRN1	Q8IZH2	1706 aa	Known RBP	10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	WRB	O00258	174 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	FANCG	O15287	622 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	PTH	P01270	115 aa		10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	C4BPA	P04003	597 aa	Known RBP	10.06	□□□□□ -0.8
TCF7-223	ENST00000522653	MSL3P1	P0C860	447 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms