RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 FBXO43Q4G163 708 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 VWA5B1Q5TIE3 1220 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 DPY19L3Q6ZPD9 716 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 TMIEQ8NEW7 156 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 FBRSQ9HAH7 460 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 THUMPD1Q9NXG2 353 aaKnown RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 SLC2A6Q9UGQ3 507 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 C5P01031 1676 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 UBR2Q8IWV8 1755 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 DAG1Q14118 895 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 ZBTB6Q15916 424 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 FRG2Q64ET8 278 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 GPRIN1Q7Z2K8 1008 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 LMX1AQ8TE12 382 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 FRG2BQ96QU4 278 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 STOX2Q9P2F5 926 aaPredicted RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 PGAP2Q9UHJ9 254 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 KCNK6Q9Y257 313 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 FAM172BPA6NC97 362 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 KHKP50053 298 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 WDR5P61964 334 aaKnown RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 OLFML2AQ68BL7 652 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 PGBD2Q6P3X8 592 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 RTL10Q7L3V2 364 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 RALGPS2Q86X27 583 aaPredicted RBP15.76■□□□□ 0.11
USP42-207ENST00000521713 CLDN19Q8N6F1 224 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 COX18Q8N8Q8 333 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 TAPBPLQ9BX59 468 aa15.76■□□□□ 0.11
USP42-207ENST00000521713 FAM149AA5PLN7 773 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 METTL21EPA6NDL7 271 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 ATP5A1P25705 553 aaKnown RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 RORCP51449 518 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 CARTPTQ16568 116 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 TMEM44Q2T9K0 475 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 SPIN4Q56A73 249 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 FAM171BQ6P995 826 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 RANBP3LQ86VV4 465 aaPredicted RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 CILP2Q8IUL8 1156 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 WDTC1Q8N5D0 677 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 FBXO15Q8NCQ5 510 aaPredicted RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 IGSF8Q969P0 613 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 IMP4Q96G21 291 aaKnown RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 DERL2Q9GZP9 239 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 TPK1Q9H3S4 243 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 MED11Q9P086 117 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 PCDHB11Q9Y5F2 797 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 U3KQV3 271 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 CHD4Q14839 1912 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 A0A0G2JPF8 293 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 HNRNPCL3B7ZW38 293 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 TNFRSF11BO00300 401 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 CLPXO76031 633 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 HNRNPCL4P0DMR1 293 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 SAGP10523 405 aaPredicted RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 EEFSECP57772 596 aaKnown RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 KLHL24Q6TFL4 600 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 SLITRK4Q8IW52 837 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 FAM98AQ8NCA5 519 aaKnown RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 ZMIZ2Q8NF64 920 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 SGIP1Q9BQI5 828 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 PRAMEF33A0A0G2JMD5 474 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 PRORSD1PA6NEY8 169 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 FABP12A6NFH5 140 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 GNB5O14775 395 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 PRAMEF10O60809 474 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 FAM174BQ3ZCQ3 159 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 PLEKHS1Q5SXH7 462 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 SPAG16Q8N0X2 631 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 PIWIL1Q96J94 861 aaKnown RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 ERVK-11Q9UQG0 969 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 FAM234BA2RU67 622 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 DCLK1O15075 740 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 CD247P20963 164 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 TMEM115Q12893 351 aaPredicted RBP15.75■□□□□ 0.11
USP42-207ENST00000521713 ELOCQ15369 112 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 NAPRTQ6XQN6 538 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 GALNT5Q7Z7M9 940 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 CADM2Q8N3J6 435 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 CRELD1Q96HD1 420 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 NDC1Q9BTX1 674 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 TAC3Q9UHF0 121 aa15.75■□□□□ 0.11
USP42-207ENST00000521713 A8MT66 165 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 KLK3P07288 261 aaPredicted RBP15.74■□□□□ 0.11
USP42-207ENST00000521713 DUSP3P51452 185 aaPredicted RBP15.74■□□□□ 0.11
USP42-207ENST00000521713 SLC30A8Q8IWU4 369 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 TRPV3Q8NET8 790 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 TUBA1CQ9BQE3 449 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 COPS4Q9BT78 406 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 A0A0J9YVX5 310 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 A0A1W2PRB8 838 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 XKRYO14609 159 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 DNAJB5O75953 348 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 EMC10Q5UCC4 262 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 RNASE11Q8TAA1 199 aaKnown RBP15.74■□□□□ 0.11
USP42-207ENST00000521713 POPDC3Q9HBV1 291 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 H3BSA7 217 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 SLC6A4P31645 630 aa15.74■□□□□ 0.11
USP42-207ENST00000521713 CSTF2P33240 577 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP42-207ENST00000521713 ALDH3A2P51648 485 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms