RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 CAMK2DQ13557 499 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 BTG3Q14201 252 aaPredicted RBP6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 CCDC40Q4G0X9 1142 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 ASPRV1Q53RT3 343 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 GRTP1Q5TC63 336 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 TATDN1Q6P1N9 297 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 PIWIL4Q7Z3Z4 852 aaKnown RBP6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 DSG4Q86SJ6 1040 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 SLC9B2Q86UD5 537 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 PI4KAP1Q8N8J0 262 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 L3MBTL4Q8NA19 623 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 Q8NFD4 153 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 FBXO30Q8TB52 745 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 ATL1Q8WXF7 558 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 MRPS27Q92552 414 aaKnown RBP6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 CCT7Q99832 543 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 NAA11Q9BSU3 229 aaPredicted RBP6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 LMF2Q9BU23 707 aaKnown RBP6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 NUP85Q9BW27 656 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 ST6GALNAC4Q9H4F1 302 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 BICC1Q9H694 974 aaKnown RBP6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 ABCF3Q9NUQ8 709 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 ZNF446Q9NWS9 450 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 DPP3Q9NY33 737 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 SPIN1Q9Y657 262 aaPredicted RBP6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 ASXL1Q8IXJ9 1541 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 ANKRD50Q9ULJ7 1429 aa6.23□□□□□ -1.41
NUDCD1-204ENST00000521439 WDR7Q9Y4E6 1490 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 A0A1W2PPM1 405 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 MED19A0JLT2 244 aaPredicted RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 EME2A4GXA9 379 aaPredicted RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 CCDC69A6NI79 296 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 RSPH10B2B2RC85 870 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SGK1O00141 431 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 NVLO15381 856 aaKnown RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SLC7A4O43246 635 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 MT-ND3P03897 115 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 RSPH10BP0C881 870 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 THEGLP0DJG4 465 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 DLATP10515 647 aaKnown RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 ERCC2P18074 760 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 ATP5OP48047 213 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SLC9A3P48764 834 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 TPM4P67936 248 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 PITX1P78337 314 aaPredicted RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 GAGE5Q13069 117 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 GAGE6Q13070 117 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SNX1Q13596 522 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 STK11Q15831 433 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SNCBQ16143 134 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 TWF2Q6IBS0 349 aaKnown RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 KCTD8Q6ZWB6 473 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 PPP1R42Q7Z4L9 355 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 EXOC3L1Q86VI1 746 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 VSIG1Q86XK7 387 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 DCP1BQ8IZD4 617 aaKnown RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 MAML2Q8IZL2 1156 aaPredicted RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SPATA20Q8TB22 786 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 GDAP1Q8TB36 358 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SPDL1Q96EA4 605 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SNF8Q96H20 258 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 RBM41Q96IZ5 413 aaKnown RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 ARL5BQ96KC2 179 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 ALS2CR12Q96Q35 445 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 SEPHS2Q99611 448 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 UPF3BQ9BZI7 483 aaKnown RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 GLT8D2Q9H1C3 349 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 PSTPIP2Q9H939 334 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 PANK3Q9H999 370 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 DDX18Q9NVP1 670 aaKnown RBP6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 ZNF112Q9UJU3 913 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 IQGAP1P46940 1657 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 ERBINQ96RT1 1412 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 NEURL4Q96JN8 1562 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 MYOM2P54296 1465 aa6.22□□□□□ -1.41
NUDCD1-204ENST00000521439 POLR3AO14802 1390 aaPredicted RBP6.21□□□□□ -1.41
NUDCD1-204ENST00000521439 GOLGA6L7A0A1B0GV03 622 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 AP3B1O00203 1094 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 CACNB4O00305 520 aaPredicted RBP6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 OR10H2O60403 315 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 PALMO75781 387 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 CELF2O95319 508 aaKnown RBP6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 HSPA4LO95757 839 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 NPPAP01160 153 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 HAAOP46952 286 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 SULT1E1P49888 294 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 PLTPP55058 493 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 HNRNPKP61978 463 aaKnown RBP eCLIP6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 CETN1Q12798 172 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 MAPRE2Q15555 327 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 CCDC57Q2TAC2 916 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 VWC2Q2TAL6 325 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 KLHL26Q53HC5 615 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 SIRPB2Q5JXA9 342 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 PDSS1Q5T2R2 415 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 TMPRSS11FQ6ZWK6 438 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 LPCAT2Q7L5N7 544 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 APLFQ8IW19 511 aaPredicted RBP6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 POC1AQ8NBT0 407 aa6.21□□□□□ -1.42
NUDCD1-204ENST00000521439 PPFIBP2Q8ND30 876 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms