RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 RRM1P23921 792 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 RGS7P49802 495 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 DNA2P51530 1060 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ARPP19P56211 112 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 SLC8A3P57103 927 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 TSPY1Q01534 308 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 PTP4A2Q12974 167 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 BTG3Q14201 252 aaPredicted RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 MESDQ14696 234 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 EFNB3Q15768 340 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ZNF876PQ49A33 203 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 C2CD6Q53TS8 623 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 PPP6R3Q5H9R7 873 aaPredicted RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 CYP4A22Q5TCH4 519 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ARHGAP17Q68EM7 881 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 LIN54Q6MZP7 749 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 CES5AQ6NT32 575 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 DNAJC24Q6P3W2 148 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 WDR73Q6P4I2 378 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 PSRC1Q6PGN9 363 aaPredicted RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 PHF13Q86YI8 300 aaPredicted RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 LURAP1LQ8IV03 231 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ANKRD52Q8NB46 1076 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ADAD2Q8NCV1 583 aaKnown RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 MSANTD4Q8NCY6 345 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 SLC24A4Q8NFF2 622 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 TRIM58Q8NG06 486 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 SPATA18Q8TC71 538 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 SLC2A14Q8TDB8 520 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 TMEM170AQ8WVE7 144 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ALG14Q96F25 216 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ABHD8Q96I13 439 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ZNF558Q96NG5 402 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ALS2CR12Q96Q35 445 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 NAPGQ99747 312 aaPredicted RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 ELAC2Q9BQ52 826 aaKnown RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 RTP3Q9BQQ7 232 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ACBD6Q9BR61 282 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 TMEM175Q9BSA9 504 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 HERC2P3Q9BVR0 1158 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 NUP85Q9BW27 656 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 NPLQ9BXD5 320 aaPredicted RBP3.9□□□□□ -1.79
CLK4-207ENST00000520909 CWH43Q9H720 699 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 PARVAQ9NVD7 372 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 CYTH4Q9UIA0 394 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 GTF3C4Q9UKN8 822 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ADAM28Q9UKQ2 775 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 TSPAN16Q9UKR8 245 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 CDH9Q9ULB4 789 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 PSAT1Q9Y617 370 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 CEP290O15078 2479 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 ATP8B3O60423 1300 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 A0A087WV62 115 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 E7EVH7 732 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 ADAP00813 363 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SETSIPP0DME0 302 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 HNRNPH1P31943 449 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 CDH5P33151 784 aaPredicted RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 GPD2P43304 727 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SSR1P43307 286 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 ACADSBP45954 432 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 MAP3K7CLP57077 242 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SNX16P57768 344 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 YWHAHQ04917 246 aaPredicted RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 BST2Q10589 180 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 ELAVL2Q12926 359 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 MAMLD1Q13495 774 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 RPS6KA1Q15418 735 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 MAPRE1Q15691 268 aaKnown RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 USP41Q3LFD5 358 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 FBXO43Q4G163 708 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PTPN20Q4JDL3 420 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 CTXN3Q4LDR2 81 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SLC39A12Q504Y0 691 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PAPPA-AS1Q5QFB9 102 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SH2D4BQ5SQS7 431 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 OR6B2Q6IFH4 312 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PMF1Q6P1K2 205 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PGBD2Q6P3X8 592 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 FUT10Q6P4F1 479 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 FAM171BQ6P995 826 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 DCUN1D2Q6PH85 259 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 LCTLQ6UWM7 567 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PAQR9Q6ZVX9 377 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PEX26Q7Z412 305 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 TMEM173Q86WV6 379 aaPredicted RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 HERC6Q8IVU3 1022 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.89□□□□□ -1.79
CLK4-207ENST00000520909 SYCE1Q8N0S2 351 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 COLGALT1Q8NBJ5 622 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 OR10T2Q8NGX3 314 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 ZNF564Q8TBZ8 553 aaPredicted RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 HERVK_113Q902F9 699 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 MYLPFQ96A32 169 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 ZNF689Q96CS4 500 aaPredicted RBP3.89□□□□□ -1.79
CLK4-207ENST00000520909 B3GALT6Q96L58 329 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 ZNF599Q96NL3 588 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 CPXM1Q96SM3 734 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 PSMB7Q99436 277 aa3.89□□□□□ -1.79
CLK4-207ENST00000520909 RAD9AQ99638 391 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms