RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NPIPA5E9PKD4 350 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 KIF2AO00139 706 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ADAM10O14672 748 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ARHGEF9O43307 516 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 MFSD11O43934 449 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 SUN1O94901 812 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FKBP9O95302 570 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 NDST3O95803 873 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 HNRNPCP07910 306 aaKnown RBP eCLIP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 MMP2P08253 660 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 SKILP12757 684 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 UGT2B7P16662 529 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF24P17028 368 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 EEF1GP26641 437 aaKnown RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 PRLHRP49683 370 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FOXL2P58012 376 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 PMP22Q01453 160 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 NIPAL4Q0D2K0 466 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 OLIG2Q13516 323 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 BOP1Q14137 746 aaKnown RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 KEAP1Q14145 624 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 KRT81Q14533 505 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 IHHQ14623 411 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 KIR2DS3Q14952 304 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 PAFAH1B3Q15102 231 aaKnown RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 TCEAL1Q15170 157 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 MEP1AQ16819 746 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FILIP1LQ4L180 1135 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 GPRC6AQ5T6X5 926 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ACAD10Q6JQN1 1059 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 NEK10Q6ZWH5 1172 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 NT5DC3Q86UY8 548 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 SIAH3Q8IW03 269 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 CFAP206Q8IYR0 622 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 WFDC11Q8NEX6 87 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FAM57AQ8TBR7 257 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 STT3BQ8TCJ2 826 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 HSPH1Q92598 858 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 SLC22A18Q96BI1 424 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 MVB12AQ96EY5 273 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 LRRC46Q96FV0 321 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FAM46AQ96IP4 442 aaKnown RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 COX4I2Q96KJ9 171 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 FRMD6Q96NE9 622 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 OR2A14Q96R47 310 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 TRIB3Q96RU7 358 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 PCDHB18PQ96TA0 734 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 AGPAT1Q99943 283 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 SMR3AQ99954 134 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 UTP23Q9BRU9 249 aaKnown RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 TRIM51Q9BSJ1 452 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 KLHL25Q9H0H3 589 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF700Q9H0M5 742 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 GANQ9H2C0 597 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 OR52A5Q9H2C5 316 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 KCNF1Q9H3M0 494 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 C7orf69Q9H7B7 122 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ZNF304Q9HCX3 659 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 IL26Q9NPH9 171 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 SAMSN1Q9NSI8 373 aaKnown RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 BEX4Q9NWD9 120 aaPredicted RBP4.64□□□□□ -1.67
SDCBP-207ENST00000520168 NPIPA1Q9UND3 350 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 RNF6Q9Y252 685 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ASB1Q9Y576 335 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 ALG6Q9Y672 507 aa4.64□□□□□ -1.67
SDCBP-207ENST00000520168 LOC102723996A0A087X1L8 192 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 A6NNC1 897 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 LINC01387J3KSC0 135 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 HCRTR1O43613 425 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 SRPX2O60687 465 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ATE1O95260 518 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 F10P00742 488 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 IFNA2P01563 188 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 TPOP07202 933 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 CHRM5P08912 532 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PIRTP0C851 137 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 MYBL1P10243 752 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ITGAMP11215 1152 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PCSK6P29122 969 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PTGS2P35354 604 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 KIR2DL3P43628 341 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 POLR2FP61218 127 aaKnown RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 IFI35P80217 286 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 TMPRSS15P98073 1019 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PLOD1Q02809 727 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PIGHQ14442 188 aaPredicted RBP4.63□□□□□ -1.67
SDCBP-207ENST00000520168 NR1I3Q14994 352 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 OR1C1Q15619 314 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ZIC1Q15915 447 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 SLC25A35Q3KQZ1 300 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 NCBP2-AS2Q69YL0 99 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 H3F3CQ6NXT2 135 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 PODNL1Q6PEZ8 512 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 KDELC1Q6UW63 502 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 ARSKQ6UWY0 536 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 FAM151BQ6UXP7 276 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 SHISA6Q6ZSJ9 500 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 CEP128Q6ZU80 1094 aa4.63□□□□□ -1.67
SDCBP-207ENST00000520168 NCCRP1Q6ZVX7 275 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms