RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 CALCOCO2Q13137 446 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 XRCC4Q13426 336 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TDGQ13569 410 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PEX6Q13608 980 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ZNF235Q14590 738 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 RFTN1Q14699 578 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 STARD3Q14849 445 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 MTF1Q14872 753 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PPP1R7Q15435 360 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TEAD2Q15562 447 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 DPYSL2Q16555 572 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CDO1Q16878 200 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TCTN1Q2MV58 587 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ASTE1Q2TB18 679 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 ITPRIPL2Q3MIP1 535 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 MAP9Q49MG5 647 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PTPN20Q4JDL3 420 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ARL13AQ5H913 290 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 PPP6R3Q5H9R7 873 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 FAM46CQ5VWP2 391 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 IL31Q6EBC2 164 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ITPRIPL1Q6GPH6 555 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PPP4R4Q6NUP7 873 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 WDR59Q6PJI9 974 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CD300LGQ6UXG3 332 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 RAD9BQ6WBX8 426 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PPP1R21Q6ZMI0 780 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ZNF852Q6ZMS4 543 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 FAM183BPQ6ZVS7 135 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PAQR9Q6ZVX9 377 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CHST9Q7L1S5 443 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 GET4Q7L5D6 327 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 DGLUCYQ7Z3D6 616 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ANKS1BQ7Z6G8 1248 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TMCO2Q7Z6W1 182 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 LINC00523Q86TU6 105 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CTAGE6Q86UF2 777 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TMEM173Q86WV6 379 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 RALGPS2Q86X27 583 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 CDKL3Q8IVW4 592 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 ARID3BQ8IVW6 561 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 MFN1Q8IWA4 741 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 MFSD6LQ8IWD5 586 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CTAGE4Q8IX94 777 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 KLHDC8BQ8IXV7 354 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CCDC105Q8IYK2 499 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ZDHHC23Q8IYP9 409 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 KATNAL2Q8IYT4 538 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CPXM2Q8N436 756 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ATPAF2Q8N5M1 289 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 HORMAD2Q8N7B1 307 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TMEM217Q8N7C4 229 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CCDC89Q8N998 374 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TEX45Q8NA69 505 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ZNF114Q8NC26 417 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ZNF485Q8NCK3 441 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 SCAMP5Q8TAC9 235 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CEP76Q8TAP6 659 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 FAM110DQ8TAY7 271 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 ACTRT1Q8TDG2 376 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 DQX1Q8TE96 717 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 SLC20A1Q8WUM9 679 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TFB1MQ8WVM0 346 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 SORCS1Q8WY21 1168 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PPM1EQ8WY54 764 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.84□□□□□ -2.11
CCNC-208ENST00000519617 HSPH1Q92598 858 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 RUBCNQ92622 972 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 KRT35Q92764 455 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 FGF13Q92913 245 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 NT5C3BQ969T7 300 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 SKA1Q96BD8 255 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ARHGEF26Q96DR7 871 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 PPP1R16AQ96I34 528 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 B3GALT6Q96L58 329 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CFAP57Q96MR6 1250 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 ZNF599Q96NL3 588 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 GFM1Q96RP9 751 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 TWNKQ96RR1 684 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 NPY6RQ99463 290 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 CDX2Q99626 313 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 CHP1Q99653 195 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 RTP3Q9BQQ7 232 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 BBS2Q9BXC9 721 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 RAB17Q9H0T7 212 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 SDCBP2Q9H190 292 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 MFSD1Q9H3U5 465 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 DHX35Q9H5Z1 703 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 UBE2ZQ9H832 354 aaPredicted RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 TRPV4Q9HBA0 871 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TRPV5Q9NQA5 729 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 DYRK4Q9NR20 520 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.84□□□□□ -2.11
CCNC-208ENST00000519617 TMLHEQ9NVH6 421 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 DUS2Q9NX74 493 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 MTMR10Q9NXD2 777 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 TRMT1Q9NXH9 659 aaKnown RBP1.84□□□□□ -2.11
CCNC-208ENST00000519617 ARHGEF38Q9NXL2 777 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 IL37Q9NZH6 218 aa1.84□□□□□ -2.11
CCNC-208ENST00000519617 COX16Q9P0S2 106 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms