RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 BTBD16Q32M84 506 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 HNRNPA1L2Q32P51 320 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 DPCR1Q3MIW9 517 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TAF1BQ53T94 588 aaPredicted RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 ZNF766Q5HY98 468 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ZNF667Q5HYK9 610 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ZNF484Q5JVG2 852 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 SPANXN2Q5MJ10 180 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CBWD5Q5RIA9 395 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ZDHHC20Q5W0Z9 365 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 KCTD11Q693B1 232 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 SPECC1LQ69YQ0 1117 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 WBP2NLQ6ICG8 309 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 DGAT2L7PQ6IED9 249 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 DENND1BQ6P3S1 775 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 C1orf186Q6ZWK4 172 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CAMKMTQ7Z624 323 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 PIP4P1Q86T03 277 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 RTN4RL2Q86UN3 420 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CUZD1Q86UP6 607 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CCDC50Q8IVM0 306 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ARID3BQ8IVW6 561 aaPredicted RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 CCDC28AQ8IWP9 274 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ARHGAP12Q8IWW6 846 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TIGD4Q8IY51 512 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 UBE2J2Q8N2K1 259 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 LIX1Q8N485 282 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ASCC1Q8N9N2 400 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 FSIP1Q8NA03 581 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TMEM116Q8NCL8 245 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ZNF397Q8NF99 534 aaPredicted RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 DBF4BQ8NFT6 615 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TSPAN14Q8NG11 270 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 OR5T1Q8NG75 326 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 OR2T3Q8NH03 318 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 LRRC8CQ8TDW0 803 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TAS1R2Q8TE23 839 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 HEXDCQ8WVB3 486 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 DYDC1Q8WWB3 177 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CAPSLQ8WWF8 208 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CKAP2Q8WWK9 683 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TANKQ92844 425 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 DNASE1L2Q92874 299 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CELF1Q92879 486 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 MCUR1Q96AQ8 359 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 MED30Q96HR3 178 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ZNF668Q96K58 619 aaPredicted RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 SPATA13Q96N96 652 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TSNARE1Q96NA8 513 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ZNF607Q96SK3 696 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 GAD1Q99259 594 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CD180Q99467 661 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CHP1Q99653 195 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ACBD6Q9BR61 282 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 PIGQQ9BRB3 760 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CCM2Q9BSQ5 444 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TDRD1Q9BXT4 1180 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 IFIH1Q9BYX4 1025 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 OSBPL8Q9BZF1 889 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 TRIM4Q9C037 500 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 OR52A5Q9H2C5 316 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 OR51V1Q9H2C8 321 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 BLZF1Q9H2G9 400 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 MTIF3Q9H2K0 278 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 RGCCQ9H4X1 137 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 RPF1Q9H9Y2 349 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 PARVBQ9HBI1 364 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 NEK6Q9HC98 313 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 NT5MQ9NPB1 228 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 RRP7BPQ9NSQ0 103 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 MAN2C1Q9NTJ4 1040 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 PANK4Q9NVE7 773 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ALKBH4Q9NXW9 302 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 GAR1Q9NY12 217 aaKnown RBP2.58□□□□□ -2
PABPC1-211ENST00000519596 MIS18AQ9NYP9 233 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 WNT16Q9UBV4 365 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CTSFQ9UBX1 484 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 STEAP1Q9UHE8 339 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 SLC7A8Q9UHI5 535 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 PADI1Q9ULC6 663 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 VANGL2Q9ULK5 521 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 STAP1Q9ULZ2 295 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 NFU1Q9UMS0 254 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 NENFQ9UMX5 172 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 VPS4AQ9UN37 437 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 CDC14AQ9UNH5 594 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 PLCL2Q9UPR0 1127 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ICKQ9UPZ9 632 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 NCKAP1Q9Y2A7 1128 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 PPIL1Q9Y3C6 166 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 MAU2Q9Y6X3 613 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ELP1O95163 1332 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 ANKRD30AQ9BXX3 1397 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 NCAPD2Q15021 1401 aa2.58□□□□□ -2
PABPC1-211ENST00000519596 EDDM13A0A1B0GTR0 161 aa2.57□□□□□ -2
PABPC1-211ENST00000519596 FAM240BA0A1B0GVZ2 78 aa2.57□□□□□ -2
PABPC1-211ENST00000519596 GOLGA6L9A6NEM1 432 aa2.57□□□□□ -2
PABPC1-211ENST00000519596 TUBAL3A6NHL2 446 aa2.57□□□□□ -2
PABPC1-211ENST00000519596 FAM90A20PA6NIJ5 464 aa2.57□□□□□ -2
PABPC1-211ENST00000519596 SH2D7A6NKC9 451 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms