RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PTGISQ16647 500 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 ZFP69Q49AA0 526 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 LACTB2Q53H82 288 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-207ENST00000518569 SLC25A47Q6Q0C1 308 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 METTL23Q86XA0 190 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 ERC1Q8IUD2 1116 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 EGFL6Q8IUX8 553 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 TIGD4Q8IY51 512 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 THNSL1Q8IYQ7 743 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 TEX9Q8N6V9 391 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 NKAIN3Q8N8D7 197 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 ARL10Q8N8L6 244 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 ZNF248Q8NDW4 579 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 DBF4BQ8NFT6 615 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 OR1L3Q8NH93 324 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 SETD6Q8TBK2 473 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 SEPT1Q8WYJ6 367 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 TBC1D31Q96DN5 1066 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 ERO1AQ96HE7 468 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 C4orf45Q96LM5 186 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 SPATA33Q96N06 139 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 ZMAT2Q96NC0 199 aaKnown RBP3.24□□□□□ -1.89
VPS13B-207ENST00000518569 PAIP2Q9BPZ3 127 aaKnown RBP3.24□□□□□ -1.89
VPS13B-207ENST00000518569 KATNB1Q9BVA0 655 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 FAM129AQ9BZQ8 928 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 THAP2Q9H0W7 228 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 ZCCHC17Q9NP64 241 aaKnown RBP3.24□□□□□ -1.89
VPS13B-207ENST00000518569 EPS15L1Q9UBC2 864 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 PYGO1Q9Y3Y4 419 aa3.24□□□□□ -1.89
VPS13B-207ENST00000518569 TRBV5-5A0A0J9YX44 114 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 WDR46O15213 610 aaKnown RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 EXTL3O43909 919 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 ZFAND5O76080 213 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 SEC24AO95486 1093 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 CCDC159P0C7I6 412 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 SLC2A2P11168 524 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 DARSP14868 501 aaKnown RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 TCF4P15884 667 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 TDO2P48775 406 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 RGS7P49802 495 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 SNRPD1P62314 119 aaKnown RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 MYL7Q01449 175 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 ZKSCAN8Q15776 578 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 TWISTNBQ3B726 338 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 ARMC3Q5W041 872 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 LYSMD4Q5XG99 296 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 PWWP2BQ6NUJ5 590 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 FIP1L1Q6UN15 594 aaKnown RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 MOXD1Q6UVY6 613 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 SUSD1Q6UWL2 747 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 TMEM207Q6UWW9 146 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 DNAJB7Q7Z6W7 309 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 SNX32Q86XE0 403 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 VSIG1Q86XK7 387 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 LACC1Q8IV20 430 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 DCLK2Q8N568 766 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 ANKRD13CQ8N6S4 541 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 CTCFLQ8NI51 663 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 OCC1Q8TAD7 63 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 ZNRF4Q8WWF5 429 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 NSMAFQ92636 917 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 N4BP2L2Q92802 583 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 PGM2Q96G03 612 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 MAGED4Q96JG8 741 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 GBP5Q96PP8 586 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 KRT12Q99456 494 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 NKX3-1Q99801 234 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 FERMT1Q9BQL6 677 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 GTPBP2Q9BX10 602 aaKnown RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 MRPL9Q9BYD2 267 aaKnown RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 SDCBP2Q9H190 292 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 MAN2C1Q9NTJ4 1040 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 ZDHHC18Q9NUE0 388 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 BARHL2Q9NY43 387 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 TMEM181Q9P2C4 612 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 WDR37Q9Y2I8 494 aa3.23□□□□□ -1.89
VPS13B-207ENST00000518569 MRPS28Q9Y2Q9 187 aaKnown RBP3.23□□□□□ -1.89
VPS13B-207ENST00000518569 HTR3EA5X5Y0 456 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 MOCS3O95396 460 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 HSPA4LO95757 839 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 GBAP04062 536 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 SPP1P10451 314 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 PDGFRAP16234 1089 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 ADRA2CP18825 462 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 EPORP19235 508 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 TYMPP19971 482 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 LHCGRP22888 699 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 CD27P26842 260 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 HOXC13P31276 330 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 CAPZA1P52907 286 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 SH3BGRP55822 239 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-207ENST00000518569 MTCP1P56278 107 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 KRT83P78385 493 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 SP3Q02447 781 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 CACNG1Q06432 222 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 RASGEF1BQ0VAM2 473 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 SGSM1Q2NKQ1 1148 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 ZC2HC1BQ5TFG8 222 aa3.22□□□□□ -1.89
VPS13B-207ENST00000518569 FAM91A1Q658Y4 838 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms