RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ARHGAP40Q5TG30 622 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 YOD1Q5VVQ6 348 aaPredicted RBP21.04■□□□□ 0.96
VEGFA-217ENST00000518538 ZNF385CQ66K41 422 aaPredicted RBP21.04■□□□□ 0.96
VEGFA-217ENST00000518538 ADGRD1Q6QNK2 874 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 THOC6Q86W42 341 aaKnown RBP21.04■□□□□ 0.96
VEGFA-217ENST00000518538 KLHDC8AQ8IYD2 350 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 OR4N4Q8N0Y3 316 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 TTC29Q8NA56 475 aaPredicted RBP21.04■□□□□ 0.96
VEGFA-217ENST00000518538 PDPRQ8NCN5 879 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 PROKR1Q8TCW9 393 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 SLC45A3Q96JT2 553 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 OR2A5Q96R48 311 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 DPH2Q9BQC3 489 aaPredicted RBP21.04■□□□□ 0.96
VEGFA-217ENST00000518538 PKD1L2Q7Z442 2459 aa21.04■□□□□ 0.96
VEGFA-217ENST00000518538 TRIM49D1C9J1S8 452 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 H0YGG7 62 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 KERAO60938 352 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 KLHL2O95198 593 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 SNRPAP09012 282 aaKnown RBP21.03■□□□□ 0.96
VEGFA-217ENST00000518538 CDH1P12830 882 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 TCN2P20062 427 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 ARF3P61204 181 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-217ENST00000518538 CSNK1G2P78368 415 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 DNASE1L3Q13609 305 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 SULT1C3Q6IMI6 304 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 WDR93Q6P2C0 686 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 FAM199XQ6PEV8 388 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-217ENST00000518538 GPR155Q7Z3F1 870 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 ABHD11Q8NFV4 315 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 UBLCP1Q8WVY7 318 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-217ENST00000518538 GBP5Q96PP8 586 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 ATOH8Q96SQ7 321 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 CCDC77Q9BR77 488 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 VPS11Q9H270 941 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 CHST8Q9H2A9 424 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 STARD5Q9NSY2 213 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 TXLNGQ9NUQ3 528 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 WWOXQ9NZC7 414 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 NUDT4Q9NZJ9 180 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 CD274Q9NZQ7 290 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 DHCR7Q9UBM7 475 aaKnown RBP21.03■□□□□ 0.96
VEGFA-217ENST00000518538 IL17BQ9UHF5 180 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 KCND3Q9UK17 655 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 LHX6Q9UPM6 363 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 SLC22A14Q9Y267 594 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 PCDHGA6Q9Y5G7 932 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 ANKRD12Q6UB98 2062 aa21.03■□□□□ 0.96
VEGFA-217ENST00000518538 WDR47O94967 919 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 S100BP04271 92 aaPredicted RBP21.02■□□□□ 0.96
VEGFA-217ENST00000518538 AGXTP21549 392 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 F8A1P23610 371 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 GGT5P36269 586 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 SLC6A12P48065 614 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 KCNC1P48547 511 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 CCR8P51685 355 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 RPS15AP62244 130 aaKnown RBP21.02■□□□□ 0.96
VEGFA-217ENST00000518538 ACAP2Q15057 778 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 C18orf21Q32NC0 220 aaPredicted RBP21.02■□□□□ 0.96
VEGFA-217ENST00000518538 KLC3Q6P597 504 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 CNPY4Q8N129 248 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 RHEBL1Q8TAI7 183 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 SLC5A11Q8WWX8 675 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 NEIL2Q969S2 332 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 RERGQ96A58 199 aaPredicted RBP21.02■□□□□ 0.96
VEGFA-217ENST00000518538 MTBPQ96DY7 904 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 TMEM79Q9BSE2 394 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 GPR87Q9BY21 358 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 FAM117AQ9C073 453 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 SYNPO2LQ9H987 977 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 CNOT10Q9H9A5 744 aaKnown RBP21.02■□□□□ 0.96
VEGFA-217ENST00000518538 CUTCQ9NTM9 273 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.02■□□□□ 0.966e-10■□□□□ 8.2
VEGFA-217ENST00000518538 DYRK1BQ9Y463 629 aa21.02■□□□□ 0.96
VEGFA-217ENST00000518538 V9GYY5 206 aaPredicted RBP21.02■□□□□ 0.96
VEGFA-217ENST00000518538 ZNF891A8MT65 544 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-217ENST00000518538 TAPBPO15533 448 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 IPO13O94829 963 aaKnown RBP21.01■□□□□ 0.95
VEGFA-217ENST00000518538 EIF2S1P05198 315 aaKnown RBP21.01■□□□□ 0.95
VEGFA-217ENST00000518538 PRTGQ2VWP7 1150 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 FAM214AQ32MH5 1076 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 C1orf189Q5VU69 101 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 LCN10Q6JVE6 187 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 PLD3Q8IV08 490 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 CSNK1A1LQ8N752 337 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 OR4K1Q8NGD4 311 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 STARD8Q92502 1023 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 EXT2Q93063 718 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 THAP11Q96EK4 314 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 GPR78Q96P69 363 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 PSMC3IPQ9P2W1 217 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-217ENST00000518538 PTBP2Q9UKA9 531 aaKnown RBP21.01■□□□□ 0.95
VEGFA-217ENST00000518538 KCNE2Q9Y6J6 123 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 SPTBP11277 2137 aa21.01■□□□□ 0.95
VEGFA-217ENST00000518538 HEATR5BQ9P2D3 2071 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 KCNE1BA0A087WTH5 132 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 IQANK1A0A1B0GTG1 560 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 A0A1B0GX78 115 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 HYKKA2RU49 373 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 SYCE1LA8MT33 242 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 SUPT3HB4E1H0 165 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms