RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 E7ENX8 843 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 I3L1I5 382 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ZNHIT1O43257 154 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 NRDCO43847 1150 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 NDUFS3O75489 264 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 TSPAN12O95859 305 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 EIF2S1P05198 315 aaKnown RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 HBQ1P09105 142 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ZGLP1P0C6A0 271 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PRF1P14222 555 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PKMP14618 531 aaKnown RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 OGNP20774 298 aaKnown RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ITGA3P26006 1051 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ATP5DP30049 168 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 DCTP40126 519 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 TTPAP49638 278 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 CDKN2DP55273 166 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PMP22Q01453 160 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 TAP2Q03519 686 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PCOLCEQ15113 449 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 CYP1B1Q16678 543 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ATG9BQ674R7 924 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ZNF324BQ6AW86 544 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 LINC00696Q6ZRV3 163 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 OTOAQ7RTW8 1153 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 KCNMB4Q86W47 210 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 OTUD6BQ8N6M0 293 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 OR9A1PQ8NGU1 263 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 BRIX1Q8TDN6 353 aaKnown RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 GRHL3Q8TE85 626 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 SKA2Q8WVK7 121 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 UBE2Q2Q8WVN8 375 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 N4BP2L2Q92802 583 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 MOCOSQ96EN8 888 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 GPR21Q99679 349 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 WDR77Q9BQA1 342 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 CRB3Q9BUF7 120 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 FRMD8P1Q9BZ68 369 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 WDR54Q9H977 334 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ABCF3Q9NUQ8 709 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 IRAK4Q9NWZ3 460 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PLA2G3Q9NZ20 509 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 SPATA7Q9P0W8 599 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ZC3H7BQ9UGR2 993 aaKnown RBP8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PCYOX1Q9UHG3 505 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 SLC39A10Q9ULF5 831 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 ZNF232Q9UNY5 417 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PADI2Q9Y2J8 665 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 PPP2R2CQ9Y2T4 447 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 TEX15Q9BXT5 2789 aa8.21□□□□□ -1.1
PABPC1-202ENST00000517403 SCN2AQ99250 2005 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 SPTBN1Q01082 2364 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 IGHV1-45A0A0A0MS14 117 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 A0A1W2PQ72 361 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 A6NHS1 94 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 USP1O94782 785 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 HAUS5O94927 633 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 KRT14P02533 472 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 ITGAMP11215 1152 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 IVDP26440 423 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 MST1P26927 711 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 GMPRP36959 345 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 SKIV2L2P42285 1042 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 NPY2RP49146 381 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 NR0B1P51843 470 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 PNLIPRP1P54315 467 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 RRADP55042 308 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 ADARP55265 1226 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 TBPL1P62380 186 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 PLOD1Q02809 727 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 GRM7Q14831 915 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 TMED2Q15363 201 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 CDSNQ15517 529 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 TUBB8Q3ZCM7 444 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 AARS2Q5JTZ9 985 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 RNASEH2BQ5TBB1 312 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 FHL5Q5TD97 284 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 ICE2Q659A1 982 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 NEPROQ6NW34 567 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 TRMT10BQ6PF06 316 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 TMEM207Q6UWW9 146 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 NCCRP1Q6ZVX7 275 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 NLRP9Q7RTR0 991 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 HOOK3Q86VS8 718 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 IQCKQ8N0W5 287 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 SIRT6Q8N6T7 355 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 CSNK1A1LQ8N752 337 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 CLEC1AQ8NC01 280 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 OR9A4Q8NGU2 314 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 PPP4R1Q8TF05 950 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 ASB11Q8WXH4 323 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 RAD51AP1Q96B01 352 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 THOC3Q96J01 351 aaKnown RBP8.2□□□□□ -1.1
PABPC1-202ENST00000517403 ALS2CR12Q96Q35 445 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 PANX3Q96QZ0 392 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 OR4K3Q96R72 315 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 ZFYVE21Q9BQ24 234 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 SLX1AQ9BQ83 275 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 HES7Q9BYE0 225 aa8.2□□□□□ -1.1
PABPC1-202ENST00000517403 TSGA10Q9BZW7 698 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms