RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DCLRE1BQ9H816 532 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 LZTFL1Q9NQ48 299 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 MRPL17Q9NRX2 175 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 FAM120CQ9NX05 1096 aaKnown RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 OSER1Q9NX31 292 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ANKRD10Q9NXR5 420 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 EHD3Q9NZN3 535 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 FLRT1Q9NZU1 646 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CRLS1Q9UJA2 301 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 OAZ3Q9UMX2 235 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 PLCL2Q9UPR0 1127 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 C15orf41Q9Y2V0 281 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 GRIP1Q9Y3R0 1128 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 ATG4BQ9Y4P1 393 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 FNDC1Q4ZHG4 1894 aaPredicted RBP3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 KIF27Q86VH2 1401 aa3.77□□□□□ -1.81
RNU4-60P-201ENST00000517239 CUX2O14529 1486 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 FAM240BA0A1B0GVZ2 78 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 TMEM200CA6NKL6 621 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 VWC2LB2RUY7 222 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 DIRC3C9JPN6 131 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 YKT6O15498 198 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 DFNA5O60443 496 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 LRP3O75074 770 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 DDNO94850 711 aaPredicted RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 NXPH3O95157 252 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 POP4O95707 220 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 CPNE6O95741 557 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 EGFP01133 1207 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 OR8G3PP0DMU2 310 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ITGB6P18564 788 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 DDX6P26196 483 aaKnown RBP eCLIP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 NMT1P30419 496 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PRDX2P32119 198 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ARRB2P32121 409 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PTGFRP43088 359 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 CDKN1BP46527 198 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 NUMBP49757 651 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 SLC8A3P57103 927 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 RPL23AP62750 156 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 CYP4F2P78329 520 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 MYBPC1Q00872 1141 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 BNC1Q01954 994 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 SLC20A2Q08357 652 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 FUT7Q11130 342 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PLA2G7Q13093 441 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 BTG3Q14201 252 aaPredicted RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 MVPQ14764 893 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PTPAQ15257 358 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 KLHL40Q2TBA0 621 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PCID2Q5JVF3 399 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 AKNAD1Q5T1N1 836 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PRAMEF5Q5TYX0 476 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PRAMEF6Q5VXH4 476 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PDPK2PQ6A1A2 396 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 KIAA1161Q6NSJ0 714 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ANKRD54Q6NXT1 300 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 METTL2BQ6P1Q9 378 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 TMEM65Q6PI78 240 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 KCNV1Q6PIU1 500 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 KDM7AQ6ZMT4 941 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 DCDC5Q6ZRR9 648 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PAQR9Q6ZVX9 377 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 BZW1Q7L1Q6 419 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ARHGAP22Q7Z5H3 698 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 SERPINA11Q86U17 422 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 DTX1Q86Y01 620 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ZDHHC17Q8IUH5 632 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 UEVLDQ8IX04 471 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 TRIML2Q8N7C3 387 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 LINC01356Q8N9X3 169 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 SIDT2Q8NBJ9 832 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 SCCPDHQ8NBX0 429 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PAPD5Q8NDF8 572 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 GPRC5AQ8NFJ5 357 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 RDM1Q8NG50 284 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 OR5M8Q8NGP6 311 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ADAMTS17Q8TE56 1095 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 GIPC3Q8TF64 312 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 CHPT1Q8WUD6 406 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 OSTF1Q92882 214 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ISG20Q96AZ6 181 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PTCD3Q96EY7 689 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 METTL2AQ96IZ6 378 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 C12orf66Q96MD2 445 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 ZNF582Q96NG8 517 aaPredicted RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 CATSPER2Q96P56 530 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 RAB40CQ96S21 281 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 MMS19Q96T76 1030 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 TMEM43Q9BTV4 400 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PLA2G12BQ9BX93 195 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 SGPP1Q9BX95 441 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 MRPL37Q9BZE1 423 aaKnown RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 TM6SF1Q9BZW5 370 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 LHPPQ9H008 270 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 PPP1R3EQ9H7J1 279 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 CALHM2Q9HA72 323 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 SEBOXQ9HB31 216 aaPredicted RBP3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 NEK6Q9HC98 313 aa3.76□□□□□ -1.81
RNU4-60P-201ENST00000517239 APMAPQ9HDC9 416 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms