RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 MTERF1Q99551 399 aaKnown RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ZBTB18Q99592 522 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NRTNQ99748 197 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 THTPAQ9BU02 230 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LRRC61Q9BV99 259 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DUSP15Q9H1R2 295 aaPredicted RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MMADHCQ9H3L0 296 aaPredicted RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC40A1Q9NP59 571 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR6C2Q9NZP2 312 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 VPS29Q9UBQ0 182 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KLF15Q9UIH9 416 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TMED5Q9Y3A6 229 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PCDHB11Q9Y5F2 797 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MDC1Q14676 2089 aaKnown RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CROCCQ5TZA2 2017 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TMEM131Q92545 1883 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KIR2DS5A0A0G2JLQ3 304 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 A0A0G2JNG1 304 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DYTNA2CJ06 578 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ANKDD1BA6NHY2 528 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MAGEB17A8MXT2 336 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ISM1B1AKI9 464 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KIR2DS3K7RE56 304 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FOXE1O00358 373 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MRASO14807 208 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BCAT2O15382 392 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LAMTOR5O43504 91 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MYO1DO94832 1006 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CSF2P04141 144 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CELA2BP08218 269 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CHRM5P08912 532 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BCKDHAP12694 445 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ACPPP15309 386 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 JAK1P23458 1154 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CMPK1P30085 196 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SERPINB1P30740 379 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PIK3CBP42338 1070 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 POLR2JP52435 117 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C21orf59P57076 290 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NXPH1P58417 271 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RPS13P62277 151 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ELF3P78545 371 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ABATP80404 500 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 REEP5Q00765 189 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MEF2AQ02078 507 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRDX1Q06830 199 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ACSM2AQ08AH3 577 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C1orf61Q13536 156 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RCAN2Q14206 197 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KIR2DS5Q14953 304 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KIAA0040Q15053 153 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RBBP5Q15291 538 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ELOCQ15369 112 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SF1Q15637 639 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 COQ5Q5HYK3 327 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ACSM2BQ68CK6 577 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ADNP2Q6IQ32 1131 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BLOC1S3Q6QNY0 202 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LAYNQ6UX15 382 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ARMCX6Q7L4S7 300 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ADCK2Q7Z695 626 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C11orf74Q86VG3 221 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 WDR5BQ86VZ2 330 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GKN2Q86XP6 184 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FAM129CQ86XR2 697 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DEFB107AQ8IZN7 70 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DSELQ8IZU8 1212 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PGAM4Q8N0Y7 254 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LIX1Q8N485 282 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ABHD11Q8NFV4 315 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR4E2Q8NGC2 313 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR4K1Q8NGD4 311 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C1orf216Q8TAB5 229 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC22A18Q96BI1 424 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SPDL1Q96EA4 605 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 APIPQ96GX9 242 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FCRL1Q96LA6 429 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 APOLD1Q96LR9 279 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SERPINI1Q99574 410 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NPAS2Q99743 824 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DPY30Q9C005 99 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PITHD1Q9GZP4 211 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SPNS1Q9H2V7 528 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SRMSQ9H3Y6 488 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NT5DC2Q9H857 520 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MRPS30Q9NP92 439 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DMRT3Q9NQL9 472 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRMT8Q9NR22 394 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 POT1Q9NUX5 634 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CUEDC1Q9NWM3 386 aaPredicted RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CPNE7Q9UBL6 633 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SPASTQ9UBP0 616 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ADGRE2Q9UHX3 823 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRPF19Q9UMS4 504 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DOLKQ9UPQ8 538 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RUVBL1Q9Y265 456 aaKnown RBP7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NDUFAF1Q9Y375 327 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TSC22D4Q9Y3Q8 395 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KNL1Q8NG31 2342 aa7.35□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TECTAO75443 2155 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms