RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 HORMAD2Q8N7B1 307 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 LRRN4CLQ8ND94 238 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 OR2L3Q8NG85 312 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 NUDT8Q8WV74 236 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 P3H4Q92791 437 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 MVB12AQ96EY5 273 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 SEC16BQ96JE7 1060 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 C18orf12Q96KH6 178 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 ZFYVE21Q9BQ24 234 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 C19orf43Q9BQ61 176 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 RAB11FIP5Q9BXF6 653 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 VN1R1Q9GZP7 353 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 NLE1Q9NVX2 485 aaPredicted RBP9.91□□□□□ -0.82
CLDND1-231ENST00000515620 NENFQ9UMX5 172 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 RUVBL1Q9Y265 456 aaKnown RBP9.91□□□□□ -0.82
CLDND1-231ENST00000515620 KLK4Q9Y5K2 254 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 STAB1Q9NY15 2570 aa9.91□□□□□ -0.82
CLDND1-231ENST00000515620 A0A0A6YYC8 382 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 OR51F1A6NGY5 319 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 H0YGG7 62 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 H7C0S8 307 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 I3L1I5 382 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 TFECO14948 347 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 KLK8O60259 260 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 NME2P1O60361 137 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 INHBBP09529 407 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 OR56A5P0C7T3 313 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 NME2P22392 152 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 RFC3P40938 356 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 EMP3P54852 163 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 ARF3P61204 181 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 PMPCAQ10713 525 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 GTF3C1Q12789 2109 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 SPARCL1Q14515 664 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 ITIH4Q14624 930 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 MINDY4Q4G0A6 757 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 ITPRIPL1Q6GPH6 555 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 DENND5AQ6IQ26 1287 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 UNC5DQ6UXZ4 953 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 RBM43Q6ZSC3 357 aaKnown RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 CXXC5Q7LFL8 322 aaKnown RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 CCDC50Q8IVM0 306 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 SLC5A8Q8N695 610 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 CSNK1A1LQ8N752 337 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 ARSGQ96EG1 525 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 OLFM1Q99784 485 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 TBL1YQ9BQ87 522 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 DRC3Q9H069 523 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 TP63Q9H3D4 680 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 C19orf25Q9UFG5 118 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-231ENST00000515620 L3MBTL1Q9Y468 752 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 HYOU1Q9Y4L1 999 aa9.9□□□□□ -0.82
CLDND1-231ENST00000515620 A0A0U1RQJ8 604 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 USP27XA6NNY8 438 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 HACD1B0YJ81 288 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 OR1I1O60431 355 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 RBL1P28749 1068 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 CCR7P32248 378 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 BDKRB1P46663 353 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 DLX5P56178 289 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 NUP107P57740 925 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 YBX1P67809 324 aaKnown RBP9.89□□□□□ -0.83
CLDND1-231ENST00000515620 PRPSAP1Q14558 356 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 EXT1Q16394 746 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 FIGNQ5HY92 759 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 ZNF468Q5VIY5 522 aaPredicted RBP9.89□□□□□ -0.83
CLDND1-231ENST00000515620 LRRC38Q5VT99 294 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 LRRC8BQ6P9F7 803 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 ACRBPQ8NEB7 543 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 SPATA3Q8NHX4 192 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 CDKN2AIPNLQ96HQ2 116 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 NAP1L5Q96NT1 182 aaPredicted RBP9.89□□□□□ -0.83
CLDND1-231ENST00000515620 CYTH2Q99418 400 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 DPH7Q9BTV6 452 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 ACAT2Q9BWD1 397 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 SYNPO2LQ9H987 977 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 EDARQ9UNE0 448 aa9.89□□□□□ -0.83
CLDND1-231ENST00000515620 AAR2Q9Y312 384 aaKnown RBP9.89□□□□□ -0.83
CLDND1-231ENST00000515620 A0A1B0GTH6 734 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 H7C0C1 242 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 FOXS1O43638 330 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 PRMT3O60678 531 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 VPS26AO75436 327 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 HEXAP06865 529 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 TPH1P17752 444 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
CLDND1-231ENST00000515620 ATP5OP48047 213 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 SNTB1Q13884 538 aaKnown RBP9.88□□□□□ -0.83
CLDND1-231ENST00000515620 CCSMST1Q4G0I0 132 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 FBXO42Q6P3S6 717 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 TTC23LQ6PF05 361 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 PAMR1Q6UXH9 720 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 CAMKMTQ7Z624 323 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 ANKRD37Q7Z713 158 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 SHISA5Q8N114 240 aa9.88□□□□□ -0.83
CLDND1-231ENST00000515620 RAB42Q8N4Z0 105 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms