RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CABS1Q96KC9 395 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 C10orf90Q96M02 699 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 OR2A5Q96R48 311 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 DPH2Q9BQC3 489 aaPredicted RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 CCDC177Q9NQR7 707 aaPredicted RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 ARL15Q9NXU5 204 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 CDC23Q9UJX2 597 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 RUVBL1Q9Y265 456 aaKnown RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 MRPS2Q9Y399 296 aaKnown RBP10.97□□□□□ -0.65
VCAN-212ENST00000515397 KLK4Q9Y5K2 254 aa10.97□□□□□ -0.65
VCAN-212ENST00000515397 HEATR5BQ9P2D3 2071 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 TNRC6AQ8NDV7 1962 aaKnown RBP10.96□□□□□ -0.65
VCAN-212ENST00000515397 TCRBV9S1A1TA0A576 114 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 FITM1A5D6W6 292 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 J3QKU1 62 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 LCMT2O60294 686 aaKnown RBP10.96□□□□□ -0.65
VCAN-212ENST00000515397 CCNDBP1O95273 360 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 FKBP9O95302 570 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 C8GP07360 202 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 HIST1H2AGP0C0S8 130 aaPredicted RBP10.96□□□□□ -0.65
VCAN-212ENST00000515397 CDH1P12830 882 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 NPPBP16860 134 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 HIST1H2ADP20671 130 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 GUCY2DQ02846 1103 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 FRG1Q14331 258 aaKnown RBP10.96□□□□□ -0.65
VCAN-212ENST00000515397 SSPNQ14714 243 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 EFTUD2Q15029 972 aaKnown RBP eCLIP10.96□□□□□ -0.65
VCAN-212ENST00000515397 IGFBP7Q16270 282 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 NKG7Q16617 165 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 SYT16Q17RD7 645 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 PRTGQ2VWP7 1150 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 FAM214AQ32MH5 1076 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 FBXO48Q5FWF7 155 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 VWA2Q5GFL6 755 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 PRAMEF13Q5VWM6 474 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 PPP1R32Q7Z5V6 425 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 MRGPREQ86SM8 312 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 LAPTM4BQ86VI4 370 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 APLFQ8IW19 511 aaPredicted RBP10.96□□□□□ -0.65
VCAN-212ENST00000515397 CTAGE3PQ8IX95 158 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 FDCSPQ8NFU4 85 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 OR2Y1Q8NGV0 311 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 VPS39Q96JC1 886 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 HIST1H2AHQ96KK5 128 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 HIST1H2AJQ99878 128 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 H2AFJQ9BTM1 129 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 SLC25A23Q9BV35 468 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 MFRPQ9BY79 579 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 LRRC4CQ9HCJ2 640 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 TUBD1Q9UJT1 453 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 PADI2Q9Y2J8 665 aa10.96□□□□□ -0.65
VCAN-212ENST00000515397 TENM4Q6N022 2769 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 RP1L1Q8IWN7 2480 aaPredicted RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 A0A0A6YYC8 382 aaPredicted RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 I3L1I5 382 aaPredicted RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 EIF3FO00303 357 aaPredicted RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 SLC16A5O15375 505 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 PHGDHO43175 533 aaKnown RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 BCL6P41182 706 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 MAGEA4P43358 317 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 CSNK1G2P78368 415 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 ABATP80404 500 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 MAT1AQ00266 395 aaKnown RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 TSNQ15631 228 aaKnown RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 CATSPEREQ5SY80 951 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 PRSS41Q7RTY9 318 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 ZNF572Q7Z3I7 529 aaPredicted RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 C17orf64Q86WR6 236 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 PPM1NQ8N819 430 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 NOA1Q8NC60 698 aaKnown RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 RERGQ96A58 199 aaPredicted RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 PTERQ96BW5 349 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 MMABQ96EY8 250 aaPredicted RBP10.95□□□□□ -0.66
VCAN-212ENST00000515397 TSNARE1Q96NA8 513 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 OR4K3Q96R72 315 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 SPSB2Q99619 263 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 MCMBPQ9BTE3 642 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 DHRS4Q9BTZ2 278 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 NUDT9Q9BW91 350 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 RAB17Q9H0T7 212 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 EPN3Q9H201 632 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 RHOJQ9H4E5 214 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 ZNF304Q9HCX3 659 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 TMEM184CQ9NVA4 438 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 P4HTMQ9NXG6 502 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 LUZP4Q9P127 313 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 MYO18BQ8IUG5 2567 aa10.95□□□□□ -0.66
VCAN-212ENST00000515397 CNTRLQ7Z7A1 2325 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 CTAGE15A4D2H0 777 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 OR2W5A6NFC9 320 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 NCF1BA6NI72 391 aaPredicted RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 FAM159BA6NKW6 160 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 NCF1CA8MVU1 366 aaPredicted RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 PEX12O00623 359 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 EIF3HO15372 352 aaKnown RBP eCLIP10.94□□□□□ -0.66
VCAN-212ENST00000515397 FOXS1O43638 330 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 C1QAP02745 245 aa10.94□□□□□ -0.66
VCAN-212ENST00000515397 NCF1P14598 390 aaPredicted RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 ZNF37AP17032 561 aaPredicted RBP10.94□□□□□ -0.66
VCAN-212ENST00000515397 GDF5P43026 501 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms