RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SH3GL1Q99961 368 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 MENTQ9BUN1 341 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 C1orf50Q9BV19 199 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 RAB11FIP5Q9BXF6 653 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 TRIT1Q9H3H1 467 aaKnown RBP9.86□□□□□ -0.83
SNF8-214ENST00000515174 MVB12BQ9H7P6 319 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 PELI2Q9HAT8 420 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 CCDC177Q9NQR7 707 aaPredicted RBP9.86□□□□□ -0.83
SNF8-214ENST00000515174 ACTR3BQ9P1U1 418 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 USP36Q9P275 1121 aaKnown RBP9.86□□□□□ -0.83
SNF8-214ENST00000515174 PCOLCE2Q9UKZ9 415 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 ASF1AQ9Y294 204 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 WBP11Q9Y2W2 641 aaKnown RBP9.86□□□□□ -0.83
SNF8-214ENST00000515174 SIT1Q9Y3P8 196 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 PCYT1BQ9Y5K3 369 aaPredicted RBP9.86□□□□□ -0.83
SNF8-214ENST00000515174 GMEB1Q9Y692 573 aa9.86□□□□□ -0.83
SNF8-214ENST00000515174 SPTBN2O15020 2390 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 KANSL1LA0AUZ9 987 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 E7EQ34 232 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 H0Y3Z8 333 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 NME4O00746 187 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SORBS2O94875 1100 aaKnown RBP9.85□□□□□ -0.83
SNF8-214ENST00000515174 STAMBPO95630 424 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 PGRP06401 933 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SDHBP21912 280 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 IDSP22304 550 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 ASMTP46597 345 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 CCR5P51681 352 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 NEK2P51955 445 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 DGKEP52429 567 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SLC7A2P52569 658 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 PRKCQQ04759 706 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 LRRC74AQ0VAA2 488 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SPIN4Q56A73 249 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SGO1Q5FBB7 561 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 LRIF1Q5T3J3 769 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 LCN8Q6JVE9 175 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 NANOGP8Q6NSW7 305 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 NOXRED1Q6NXP6 359 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 ABRAXAS1Q6UWZ7 409 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 CAMKMTQ7Z624 323 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 FAM129CQ86XR2 697 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 C1orf210Q8IVY1 113 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 ZNF687Q8N1G0 1237 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 LIX1Q8N485 282 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 RAB42Q8N4Z0 105 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 PPFIBP2Q8ND30 876 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 OR4K1Q8NGD4 311 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 RPLP0P6Q8NHW5 317 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 FAM174AQ8TBP5 190 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SLC5A11Q8WWX8 675 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SMPDL3AQ92484 453 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 GTF2H4Q92759 462 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 NEIL2Q969S2 332 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 CCDC124Q96CT7 223 aaKnown RBP9.85□□□□□ -0.83
SNF8-214ENST00000515174 MED8Q96G25 268 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 HBEGFQ99075 208 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 FOXQ1Q9C009 403 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 TWSG1Q9GZX9 223 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 SLC6A17Q9H1V8 727 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 RHBGQ9H310 441 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 VCX3BQ9H321 246 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 NANOGQ9H9S0 305 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 CMTM6Q9NX76 183 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 POLR3HQ9Y535 204 aaPredicted RBP9.85□□□□□ -0.83
SNF8-214ENST00000515174 OR1A2Q9Y585 309 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 HEBP2Q9Y5Z4 205 aa9.85□□□□□ -0.83
SNF8-214ENST00000515174 ZNF292O60281 2723 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 LRP4O75096 1905 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 TRBV5-3A0A0A0MS03 114 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 PRSS51A0A1B0GVH4 220 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 FPGTO14772 594 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 KDM1AO60341 852 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 MYO1DO94832 1006 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 KCNH1O95259 989 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 SLC35G4P0C7Q5 338 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 UMPSP11172 480 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 GABRG2P18507 467 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 SDC1P18827 310 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 NDUFV2P19404 249 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 HNRNPA2B1P22626 353 aaKnown RBP9.84□□□□□ -0.83
SNF8-214ENST00000515174 NDUFS1P28331 727 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 OXTRP30559 389 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 SLC7A1P30825 629 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 TRPC1P48995 793 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 TPMTP51580 245 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 NME5P56597 212 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 NFATC4Q14934 902 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 MAPKAPK3Q16644 382 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 UAP1L1Q3KQV9 507 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 AASDHQ4L235 1098 aaPredicted RBP9.84□□□□□ -0.83
SNF8-214ENST00000515174 PRAMEF14Q5SWL7 426 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 PRAMEF13Q5VWM6 474 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 DOK6Q6PKX4 331 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 RNF111Q6ZNA4 994 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 SYT13Q7L8C5 426 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 DHDDSQ86SQ9 333 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 DHFR2Q86XF0 187 aa9.84□□□□□ -0.83
SNF8-214ENST00000515174 KRT78Q8N1N4 520 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms